Chryseoglobus sp. 28M-23: IE160_02950
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Entry
IE160_02950 CDS
T06824
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
chre
Chryseoglobus sp. 28M-23
Pathway
chre00061
Fatty acid biosynthesis
chre00071
Fatty acid degradation
chre01100
Metabolic pathways
chre01212
Fatty acid metabolism
chre02024
Quorum sensing
chre04146
Peroxisome
Module
chre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
chre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IE160_02950
00071 Fatty acid degradation
IE160_02950
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IE160_02950
09145 Cellular community - prokaryotes
02024 Quorum sensing
IE160_02950
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
chre01004
]
IE160_02950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chre04147
]
IE160_02950
Enzymes [BR:
chre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IE160_02950
Lipid biosynthesis proteins [BR:
chre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IE160_02950
Exosome [BR:
chre04147
]
Exosomal proteins
Exosomal proteins of breast milk
IE160_02950
Exosomal proteins of breast cancer cells
IE160_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QOD94207
LinkDB
All DBs
Position
complement(597305..599056)
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AA seq
583 aa
AA seq
DB search
MGAGEDESPEPSAVPADVEHELVPPPFRTLPELIANAAAEYADTVAFTQCMPNGMNGSLT
YAQVEALSDAFASYLREDVGLKAGDRVAVQMPNCLSYPVVAFGILKAGCVLVNTNPLYTA
SEMIHQFSDSGAKALVIIDMFADRLPEVVAPTDVETVVTVRIGEFFPPVIAGVIRLVQKW
WNRSLPAITVEHTGLQAALASGRERLGKAESYVAHLDADSLAALQYTGGGTTGVAKGAML
SHGNLVANTLQMMQLLSTHIRPGKEVVLTALPMYHIFAFTVNLIGFFHEGARNILIPSPR
PPSNLKRAFENYKITWTTGVNTLFNALLNERWFSENPPKHLVASAAGGMALHESVSERWR
AVTGTPIVEGYGLTETSPALTFNPLGGVGKDGTIGIPVPSTDIRCVGEDGTDVGVGEPGE
LIARGPQVTAGYWNRPDDTANAMLDGWFRTGDIAQMDEDGYFTIVDRKKDMVLVSGFNVY
PNEVEERIAAMPGVLEVGVIGLPDEKTGESVRAYIVAADNPPTEAEVIAHCRETLAAYKV
PKSVRFVEELPKSPIGKILRRELRAIGVTSDTASIETQGRELS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgccggagaagacgagtcaccagaaccttcagcagtcccggccgatgtcgagcac
gagctcgtgcccccgccgttccgtactctgccggagctcatcgcgaatgcggccgcagag
tatgccgataccgtcgcgttcacgcagtgcatgcccaatggcatgaacggctcgctcacc
tacgcgcaggtcgaggcgctctccgacgccttcgcctcatacctgcgcgaggatgtgggc
ctgaaggcgggcgaccgcgtcgcggtgcagatgccgaactgcctgagctacccggtcgtc
gccttcggcatcctcaaggccggctgcgtgctcgtgaacacgaatccgctctacaccgcg
agcgagatgatccaccagttctccgactccggtgcgaaggcgctcgtgatcatcgacatg
ttcgctgaccggttgccggaagtggtcgcgccgaccgacgtcgagaccgtcgtcaccgtg
cgcatcggcgagttcttcccgcccgtcatcgcgggcgtcatccgtctcgtgcagaagtgg
tggaaccgctccctgccggccatcaccgtcgagcacacggggctgcaagcggctctcgcg
tcaggccgcgagcggctcggcaaggcggagagctatgtggcgcatctcgacgccgactcg
ctcgccgccctgcagtacaccggcggcggtacgacgggcgtcgcgaagggcgcgatgctc
agccacggcaacctcgtcgccaacacgctgcagatgatgcagctgctcagcacgcacatc
cgccccggcaaggaggtcgtgctgacggccctgccgatgtaccacatcttcgccttcacg
gtgaacctgatcggcttcttccacgagggcgcgcgcaacattctcatcccgtcgccgcga
ccgccgagcaacctcaagagagccttcgagaactacaagatcacctggacgacgggcgtg
aacacactgttcaacgccctcctcaacgagcggtggttctccgagaacccgccgaagcac
ctcgtcgcctcggcggcgggtggcatggccctccacgagtcggtctccgagcggtggcgg
gccgtcaccggcacgcccatcgtggagggctacggactcaccgagacctcgcccgccctc
accttcaacccgctcggtggggtgggcaaggacggcaccatcggcatccccgtaccgtcg
accgacatccgctgcgtcggcgaggacggcaccgacgtcggtgtcggcgagcctggcgag
ctcatcgcccgagggccacaggtgacggccggctactggaaccgccccgacgacaccgcg
aatgcgatgctcgacggctggttccgtaccggtgacatcgctcagatggacgaggacggc
tacttcacgatcgtcgaccgcaagaaggacatggttctcgtgagcggcttcaacgtctac
ccgaacgaggtcgaggagcgcatcgccgcgatgccgggagtgctcgaagtcggtgtgatc
gggctgcccgatgagaagaccggcgaatccgtgcgcgcctacatcgtcgccgcagacaac
ccacccaccgaggccgaggtgatcgcccactgccgggagaccctcgccgcctacaaggtg
ccgaagtcggtgcgtttcgtcgaggagctgcccaagagccccatcggcaagatcctccgt
cgcgagttgcgagccatcggggtcacctccgataccgcgagtatcgagacgcagggaagg
gagctgtcatga
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