Chryseoglobus sp. 28M-23: IE160_04465
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Entry
IE160_04465 CDS
T06824
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
chre
Chryseoglobus sp. 28M-23
Pathway
chre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IE160_04465 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chre03021
]
IE160_04465 (rho)
03019 Messenger RNA biogenesis [BR:
chre03019
]
IE160_04465 (rho)
Transcription machinery [BR:
chre03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IE160_04465 (rho)
Messenger RNA biogenesis [BR:
chre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IE160_04465 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
CDC27
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
QOD94833
UniProt:
A0A7M3U5P3
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All DBs
Position
906752..908860
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AA seq
702 aa
AA seq
DB search
MQSILPERFLASGDERNLNPVTDSTAPSSATGTPTDLSTLKLADLQRLAIERGIPGVSKL
RKGDLVAAIQNSSPNDAASDTSTEAAPAADQTTQAAPAANQPEQTAPAAETSEQAATSAP
AAEEAAPRRRSSRRATTDTVTPQAAAEQPAKAEQSDKSQQSAKAEQSDKAEQSDKTQQSA
KAEQSDKTQGDDADGEDSSQGGRGRGRGRSRNRGGERSEGDGADGGARGGRGRGGNQGNQ
NQAAKGGQGDGGQDDGNQGRGNQGGQNNQGNQNQGGTNGPERSERADQDSEGRGRGRGRD
RKRGRGPGGDDAEPEVSDDDVLIPVAGILDVLDNYAFVRTTGYLPGPSDVYVSLGQVKKY
QLRKGDAVVGAIRQPREGENQGRQKYNALVRVDSINGQTIEEAGARVEFSKLTPLYPTER
LRLETDPTMLSTRIIDLVAPIGKGQRGLIVSPPKAGKTLVLQAIANAIAKNNPEAHLMVV
LVDERPEEVTDMQRSVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSI
TRLGRAYNVTAPTSGRILSGGVDSAALYPPKRFFGAARNIEDGGSLTILATALVETGSKM
DEVIFEEFKGTGNMELRLSRQLADKRIFPAVDISASGTRREEMLLGADEVKVTWQLRRAL
ASLDTQQSLDMVLGKLRETGSNVEFLVAVQKSLPAAGAHKVD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcatcctccctgagcgcttcctcgccagtggagacgaaaggaacctgaacccc
gtgaccgattccacagcaccgtcgtctgcgacgggcacccccaccgatctgagcacgctc
aagctcgccgaccttcagcgtctggcgatcgagcgcggcattcccggtgtgtccaaactg
cgcaagggagacctcgtggccgccatccagaacagctcgccgaacgacgccgcgagcgac
acgtcgaccgaggccgctcccgcggctgaccagaccacgcaggccgcgccagcggccaac
cagccggagcagaccgcaccagcggcggagacgtccgagcaggcggcaacgagcgcgccg
gcagccgaggaggccgcaccgcggcgtcgctcctcgcgccgcgcgacgaccgacacggtc
acgccgcaggcggccgccgagcagcccgcgaaggccgagcagtctgacaagagccagcag
tccgcgaaggccgagcagtccgacaaggccgagcagtccgacaagacccagcagtccgcg
aaggccgagcagtccgacaagacccagggcgacgatgccgacggcgaggactcctcgcag
ggcggtcgcggtcgcggccgtggccgcagccgcaatcgcggtggcgagcgctccgagggc
gacggcgccgatggcggcgcgcgcggcggccgtggtcgcggcggcaaccagggcaaccag
aaccaggctgccaagggcggccagggcgacggcggccaggacgacggcaaccagggccgc
ggcaaccagggcggccagaacaaccagggcaaccagaaccagggcggcaccaacggcccc
gagcgctctgagcgtgccgaccaggactccgagggccgcggtcgcggtcgcgggcgtgac
cgcaagcgcggtcgcggcccgggtggcgacgacgccgagcccgaggtgagtgacgacgac
gtgctcatccccgtggcgggcatcctcgacgttctcgacaactacgcgttcgtgcgcacg
accggctacctgccgggcccgagcgacgtctacgtctcgctcggccaggtcaagaagtac
cagctgcgcaagggcgacgccgtcgtcggcgccatccgccagccgcgcgagggcgagaac
caggggcgtcagaagtacaacgcgctcgtgcgcgtcgattcgatcaacggccagacgatc
gaggaggccggtgcgcgcgtcgagttcagcaagctcactccgctgtacccgaccgagcga
ctgcgtctcgagaccgacccgacgatgctctccacgcgcatcatcgacctcgtcgcaccc
atcggcaagggccagcgcggcctcatcgtctcgccccccaaggcgggtaagacgctcgtg
ctgcaggccatcgccaacgcgatcgcgaagaacaaccccgaggcgcacctcatggtcgtg
ctcgtcgacgagcggcccgaagaggtcaccgacatgcagcgctcggtcaagggcgaggtc
atcgcctcgaccttcgatcggcccgccgaggatcacacgacggtcgccgagctcgcgatc
gagcgcgccaagcgcctcgtcgagctgggccacgacgtcgtcgtgctgctcgactcgatc
acccgcctgggccgcgcgtacaacgtgacggcgccgacgagcgggcgcatcctctcgggc
ggcgtcgactcggccgcgctgtacccgccgaagcgcttcttcggcgccgcgcgcaacatc
gaggacggcggttcgctcacgatcctcgcgaccgcactcgtcgagaccggctcgaagatg
gacgaagtgatcttcgaggagttcaagggcaccggcaacatggagctgcgcctctcgcgt
cagctcgccgacaagcgcatcttcccggccgtcgacatctcggcctcggggacgcgccgc
gaggagatgctcctcggcgccgacgaggtcaaggtcacgtggcagttgcgccgcgcgctc
gcgagcctcgacacccagcagtcgctcgacatggtgctcggcaagctgcgcgagacgggc
tcgaacgtcgagttcctcgtcgccgtgcagaagtctctgccggcggcgggcgcgcacaag
gtcgactaa
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