Chryseobacterium sp. PCH239: KBP46_02470
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Entry
KBP46_02470 CDS
T11096
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
chrh Chryseobacterium sp. PCH239
Pathway
chrh00541
Biosynthesis of various nucleotide sugars
chrh01100
Metabolic pathways
chrh01250
Biosynthesis of nucleotide sugars
Module
chrh_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
chrh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KBP46_02470 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
chrh01005
]
KBP46_02470 (kdsA)
Enzymes [BR:
chrh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
KBP46_02470 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
chrh01005
]
Lipid A
KBP46_02470 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
AF_2299-like_N
Motif
Other DBs
NCBI-ProteinID:
QWT86751
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Position
503380..504189
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AA seq
269 aa
AA seq
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MIQYLDNISHKDSKNFFLIAGPCIIEGEDMALRIAEKVISITDKYNIPYIFKGSFKKANR
SRVDSFTTIGEEKSFEILKKVGETFNIPTTTDIHENEHAALAAQYVDVLQIPAFLVRQTD
LLVAAAKTGKCVTLKKGQFLSPEAMKFAVQKITDSNNEKVAIIERGNSFGYTDLIVDYRG
IPTMREYAPVILDVTHSLQQPNQSSGVTGGRPDLIETVAKAGIAVGADGIFIETHPTPET
ALSDGANMLRLDLLEDLLQKLTRIRESIL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgattcagtatttagataatatttcgcacaaagattcaaaaaactttttccttattgcc
ggaccttgtattattgaaggggaagatatggcattaagaattgctgaaaaagtaatcagc
atcactgataaatacaatattccttatattttcaaaggaagtttcaaaaaggctaacaga
agccgtgtagattcgttcacaaccattggtgaagagaaatcttttgaaatccttaaaaaa
gtaggagagactttcaatattcctaccacaacagatatccatgaaaatgagcatgcagca
ttagccgcacagtatgtagatgttttacagattcctgcgttcctggtgcgccagactgat
ttattggtggctgctgctaaaacaggaaaatgtgttacccttaaaaaaggtcagttcctt
tctccggaagcgatgaagtttgcggttcagaaaattacagattccaataacgagaaagta
gccattattgaaagaggaaattctttcggatatacagatctgattgtagattacagagga
attcctacgatgagagaatacgctccagtgattttggatgttactcactctttacaacaa
cctaatcaaagctcaggcgttacaggaggaagaccggatcttattgaaaccgttgccaag
gcaggaattgcagtaggagcagacggaattttcatcgaaacgcatcctacaccggaaacc
gcattatctgatggtgctaacatgttaagattagatttattagaagatttgttacaaaaa
ttgacaagaattagagaatcgattttgtaa
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