Chryseobacterium sp. PCH239: KBP46_09280
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Entry
KBP46_09280 CDS
T11096
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
chrh Chryseobacterium sp. PCH239
Brite
KEGG Orthology (KO) [BR:
chrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrh03019
]
KBP46_09280
03009 Ribosome biogenesis [BR:
chrh03009
]
KBP46_09280
Messenger RNA biogenesis [BR:
chrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KBP46_09280
Ribosome biogenesis [BR:
chrh03009
]
Prokaryotic type
rRNA processing factors
KBP46_09280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
Phage_T4_Y12K
Motif
Other DBs
NCBI-ProteinID:
QWT87997
LinkDB
All DBs
Position
2048903..2050462
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AA seq
519 aa
AA seq
DB search
MKKELIVSHEDDLTKIALLEDGRLCELHEQEDKSDFIVGDLFIGKVKKLAPNLNAAFVNI
GYDKDAFLHYQDLGPQYLTYRKFLKDTISKKQSTSSLKNFEIQPEIDKNGTVDKVIAKDD
LVLLQITKEPISTKGPRISTQISLTGRFLVLIPFDNKVSISKKIRSSEEKERLRTLIDSI
KPEGFGVIIRTVAEGKKVADLHNDMNQLVQKWESTFKNIQRNKVPSKVLSEEDKASAILR
DNFNQDFVNIICDDEQMVNEMKNYIEVIAPEKKNIVQFYDSHIPLLEYYNVEKQLKQSFG
KHVNIPSSKGAYLVIEHTEALHVVDVNSGNNITTGTAVNKEHALKVNKMAATEIARQLRL
RDMGGIIVIDFIDMPNSDHRRDLYEHLKEEMKRDKARHKILPPSKFGLIQITRQRNRPEK
QIDTKEENPNKDGEIVAPIVIVERMGETLRNILQKEKGKIYLHVHPFVEAYLTKGIKSIQ
MKWFIKYKKWVTIVPRDSFKYLEYKIYNAKKEELIEFSN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaactaatagtttcgcatgaagatgatcttacaaagattgcgctgctggaa
gacggaagactatgtgaacttcatgagcaagaagacaaaagcgattttatagttggagat
ctgtttataggaaaagtaaaaaaactggcacccaatctgaatgcagcattcgtcaatatc
ggatatgacaaagatgcatttctgcattatcaggatctgggacctcagtatcttacgtac
agaaagtttttaaaagatactatttctaaaaaacaaagcacttcgagcttaaaaaatttc
gagatacaacccgaaatagacaaaaacggaacggtagacaaagtaattgccaaggacgat
cttgttctgttacaaattaccaaagaacctatttctaccaaaggtccaagaatttctacc
cagatttcattaacagggcgtttcctggttttaattccttttgacaataaagtttctatt
tccaaaaagatcagaagttctgaggaaaaagaaagactgagaacccttatcgacagcatt
aaacctgaaggattcggagtaatcatcagaacggtagcagaaggaaaaaaagtagcagac
ctgcataatgacatgaaccagctggttcagaagtgggaaagcactttcaaaaacatccag
agaaataaagttccgtctaaagttttaagcgaagaagacaaagcttcagctattctaaga
gacaattttaatcaggatttcgtgaatatcatctgcgacgatgagcaaatggtcaacgaa
atgaaaaattacattgaagtaattgcccctgaaaagaaaaacattgtccagttttatgat
tctcatattccacttctggaatattacaatgttgaaaaacagcttaaacagagcttcgga
aaacacgtcaacattccgagttccaaaggagcttatcttgttattgaacacacagaagca
cttcacgtagtagacgtcaactccggaaacaatattactaccggaactgctgtcaacaaa
gagcatgcactgaaagtgaacaaaatggctgctacagaaatcgcaagacaacttcgcctc
cgcgatatgggaggtatcatcgttatcgatttcatagatatgccgaattctgatcacaga
agagatctttacgagcatcttaaagaggaaatgaagcgcgacaaagcacgccacaaaatc
cttcctccaagtaaatttggtctgatccagattaccagacagagaaaccgtccggaaaaa
cagatcgacaccaaagaagaaaacccgaacaaagacggagaaattgtagctcctattgtt
atcgtggaaagaatgggtgaaaccttaagaaatatcctgcagaaagaaaaaggaaaaatc
tacctgcacgtacacccatttgtggaagcctaccttacaaaaggcattaaaagtatccag
atgaaatggtttatcaaatacaaaaagtgggtaaccattgttccaagggattcttttaaa
tatttagaatacaaaatctacaatgccaaaaaagaagaattgatagaattctctaattaa
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