Chryseobacterium sp. PCH239: KBP46_16990
Help
Entry
KBP46_16990 CDS
T11096
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrh Chryseobacterium sp. PCH239
Brite
KEGG Orthology (KO) [BR:
chrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrh03032
]
KBP46_16990 (topA)
03400 DNA repair and recombination proteins [BR:
chrh03400
]
KBP46_16990 (topA)
Enzymes [BR:
chrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KBP46_16990 (topA)
DNA replication proteins [BR:
chrh03032
]
Prokaryotic type
DNA Topoisomerases
KBP46_16990 (topA)
DNA repair and recombination proteins [BR:
chrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KBP46_16990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QWT85164
LinkDB
All DBs
Position
3669784..3672357
Genome browser
AA seq
857 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKAAVKKADMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IDNPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFKPKASFKLDGIFLNKTEQEIAAKLKKDFEKEEEAEKFLEQAKTTEFKILNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGFITYMRTDSVNLSQEAIEGAK
KQIISEYGAEYSSPRNYTTKSASAQEAHEAIRPTDFGVKTVADAQLNRLYQLIYRRTLAS
QMANAKIEKTVIEIGNASLPHHFEAQGEVIIFDGFLKAYGIVKAEDDDEENNDKLLPKVS
VGEVLNYKTITATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPHTREVIKMSLTKDKIKKVVLEEKFGGDKNKFVPTDIGEVVNDFLTDNFREILDYGFT
ARVEESFDEIASGDQKWKEMMTNFYSKFHPRIEDVEENADRATGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPIFASLMTGQNIATITFQEALELFKLPFDLSEVDGQPVSVG
VGRFGPYVKWGETYISIPKGEDPLSVDQKRAEEIINEKKIADAPIATYKGEPVTKGSGRF
GPFIKYKDIFVNVPKRYDFENLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FIKFGKAMFKIPKKADDTKYEADELKELSLDEVKKWITDQDPKAFAEKKKPAAKKAATTK
KTTAVKKPAAKKPAAKK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtagagtccccggcaaaagcaaaaactattcagaaatat
ctaggaaaggattttgaagtgaaatccagcttcggacacatccgtgaccttcctaaaaaa
ggaatgggtatagaccttgccacattcagtcctgattacgaagtttcagcagacaaaaag
aaattggtaaccgaattaaaggctgccgtaaagaaagctgatatggtatggctcgcttcc
gatgaggaccgcgaaggagaagctattgcatggcatcttgcggatgaattgaaactaaag
cctgaaaacagaaaaagaattgttttccacgagattaccaaaaacgccattctaaaagca
atcgacaatccaagagatattgatcagaacttagtgaatgcacagcaggcgagaagagtg
ctggacagaattgtaggttttgaaatgtctcccgttttatggaaaaaagtaaaaccggga
ctatctgcaggtagagtacagtctgtagcagtaagattaatcgttgaaagagaaaaagag
atccgtgagtttaaaccaaaagcaagctttaaactggatgggatctttttaaataaaaca
gagcaggaaattgctgccaagctgaaaaaagactttgaaaaggaagaagaggcagagaaa
ttcctggagcaggcaaagactacagaatttaaaattctcaatgttgaaaccaaaccaggt
acccgttcagcttcagcaccatttacaacctctacattgcagcaggaagcttcctcaaga
ttgggttataatgtaaccaatactatgcgtctcgcacagaggctatacgaagaagggttt
attacttatatgagaacggactctgtaaacctttcccaggaagctattgaaggagctaaa
aaacaaattatatcagaatatggagcagaatattcttctccaagaaattatactacaaaa
tcagcttcagcacaggaagctcacgaagcgatccgacctacagattttggagtgaaaact
gtagctgatgcccaattaaacaggctatatcaattaatttacagaagaacacttgcttct
cagatggctaatgccaaaattgaaaagacagtgattgaaatagggaatgcatcattgcca
catcattttgaagcacagggagaggttattatatttgatggtttcctgaaagcttatgga
attgtaaaggcagaagatgatgatgaggaaaacaacgataaattgctgccgaaagtaagt
gtgggagaagtcttgaactataaaaccattactgctactgaaaagttcacaagaccaagt
gcaagatacacggaagctggtttggtaagaaaacttgaagaattagggattggtagaccg
tctacttatgcccctaccattcagacgattcagaacagagagtatgtagataaaagagaa
atcgaaccacacacccgtgaagtgatcaaaatgtctttgacaaaagataagatcaaaaaa
gtagttcttgaagagaaatttggtggtgataaaaataaattcgttcctacggatattggt
gaagtagtcaatgatttcttaacagataatttcagagaaatccttgattatggtttcaca
gcaagagtagaagaaagttttgacgaaattgcaagcggtgatcagaagtggaaagaaatg
atgacgaatttctactctaaattccacccgagaattgaagatgtagaagaaaatgcagat
cgtgcaaccggagacagactattaggagtagatccaaagactggtaaaaatgttcatgca
agaatcggaagatttggagcgatgatccagattggagaaacggatgatgaagagaaacca
atctttgcttcgttaatgacgggacagaatattgcaaccattacttttcaagaagcattg
gagttattcaagttgcctttcgacttaagtgaagttgacggacagccggtttctgtagga
gtaggaagattcgggccttatgtgaaatggggagaaacctatatcagtattccgaaaggt
gaagatccgctttctgtagatcagaaacgtgctgaggagattatcaatgaaaagaagatt
gctgatgctccaattgctacgtataaaggagaacctgtaaccaaaggatcaggaagattc
ggaccatttatcaagtacaaagatatctttgtgaatgttcccaaaagatatgatttcgaa
aacctttcacaaagtgatatcaatgaactgattgacgctaaattggagaaagaagccaac
cgatatatccagcagtgggaaaaagaaaaaatctccattgaaaacggaagatggggacct
ttcatcaagttcggaaaagccatgtttaaaattccgaaaaaagcagatgatacaaaatat
gaagctgacgaactgaaagaactttctttagatgaggttaaaaaatggattacagatcag
gatccgaaagcttttgcagaaaagaaaaaacctgcagcaaaaaaggcagcgactactaag
aagactacagctgttaaaaaaccagctgctaagaaacctgcagctaaaaaataa
DBGET
integrated database retrieval system
