Chryseobacterium sp. PCH239: KBP46_18185
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Entry
KBP46_18185 CDS
T11096
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
chrh Chryseobacterium sp. PCH239
Brite
KEGG Orthology (KO) [BR:
chrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chrh03016
]
KBP46_18185 (truA)
Enzymes [BR:
chrh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KBP46_18185 (truA)
Transfer RNA biogenesis [BR:
chrh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KBP46_18185 (truA)
Prokaryotic type
KBP46_18185 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF759
CFAP54_N
Motif
Other DBs
NCBI-ProteinID:
QWT88573
LinkDB
All DBs
Position
3936878..3937609
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AA seq
243 aa
AA seq
DB search
MRYFIEFSYNGKNYFGYQIQPDAISVQEELEKALSTILREEIKTTGAGRTDTGVHAKKIF
AHFDTEKELDDQLVRRLNSFLPPDISIKKIFPVKDDFHARFDATYRTYEYFISLEKNPFT
QESAWQHWKRGLDVDAMNEACKILFEYEDFTSFAKLKTDNKTNICKIYKAEWEQNGTELK
FTVSANRFLRNMVRAIVGTMVEIGTGKLKPEDLRKVIEDKNRNAAGTSAPGHGLYLVDVG
YEF
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttgagatactttattgaattttcttacaacggaaagaattatttcggctaccagatacag
ccggatgccatttctgtgcaagaagaactggaaaaagcgctgtctaccattttgcgcgaa
gagataaaaactacaggagcaggaagaaccgatacaggcgttcatgctaaaaaaatattt
gcccattttgatacggaaaaagaattggatgatcagcttgtaagaagactgaacagtttt
cttcctcctgatatttccattaaaaaaatttttccggtaaaagatgattttcatgcccgt
tttgatgccacgtacagaacctacgaatattttatctcattggaaaaaaatcccttcact
caggaatctgcatggcagcactggaaaagaggtctggatgtggatgcgatgaatgaggcc
tgtaagattctttttgaatatgaagatttcaccagttttgccaagttaaaaacagacaac
aagaccaatatctgtaaaatttataaagcagagtgggaacagaacggaacggaattgaaa
tttaccgtttctgccaatcgttttctgaggaatatggttcgcgcaattgtcggaacgatg
gtagaaataggaacaggaaaactgaaaccggaagatcttcgtaaagtaattgaagacaaa
aaccgcaatgctgcaggtacctcagcgccgggacacgggctgtatctggtagatgtaggg
tatgaattttaa
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