Chromobacterium phragmitis IIBBL 112-1: DK842_01145
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Entry
DK842_01145 CDS
T05549
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chri01002
]
DK842_01145
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
chri02042
]
DK842_01145
Enzymes [BR:
chri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
DK842_01145
Peptidases and inhibitors [BR:
chri01002
]
Metallo peptidases
Family M9
DK842_01145
Bacterial toxins [BR:
chri02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
DK842_01145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
Motif
Other DBs
NCBI-ProteinID:
AXE28642
LinkDB
All DBs
Position
217227..219470
Genome browser
AA seq
747 aa
AA seq
DB search
MRSIPLAALCLALASALAAPAHAAPKTYKTPHLAKAQARQPAPPRLWQQRPPTDFQARYR
LQDNRTVIGKPQKKLVRHAATPQCQDMNALASHSGADLANYLVSLPDYTCTYGLFALDKN
LAASIYSAGNLNAVASRFAQEAAGYNASSMALVNLTLYLRAGYYLASTGALPALDPSLQS
ALRPGIKQLAAGTALFAANAQAPTTAGEVMTLITNMADEAYYLPSVRTIVQRYTNTAANP
NAAQSLRETTASQGFTGALTVFFYAHGRANAAPLLQNDGSYSAALTQFVQANKASLLGTE
TAYQLGDATREGLRFMQYPALLPAIKPQAKAILAASSMTGADNELWLAAAEAVKYYDNAN
CAEYGTCNFETKLADAVLVNRYTCSPTIRIRAQEMTTDQMQSSCALLQKEESYFHQMLQT
RNQPVANDNNASLEVVVFDDYNNYSKYAGVIYGISTDNGGMYLEGNPADPGNQARFIAHE
ASWLRPAFKVWNLEHEYIHYLDGRFDMYGDFSAATQQPTVWWIEGLAEYLSLRNDNQTAI
DVAKTGTYQLSQIYGNTYDMSDYVTRAYRWGYMATRFMFERHRADIDAMLPLWRKGDYAG
GYAGLMRQIGKRYDAEFAGWAQNATTAGQPPLPPSTGLPACNEGSPERLGKNCSISGLSS
SYAAYAAIWMPAGAHNLKLWTSGGSGDVDLYVAIDRYPTPANYDFSSVSAGNDESVAIAA
PQSGHWYYLTLQAKQPFSGVSVSASYE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcatccctctcgccgcgctgtgcctggccctggcctcggcgctggccgcgccg
gcccatgccgcgcccaaaacctataaaaccccgcacctggccaaagcccaggccaggcag
cccgcgccgccgcggctgtggcaacagcgcccgccaaccgacttccaggcccgctaccgc
ttgcaggacaaccgcaccgtgataggcaagccgcagaaaaaactggtccgccacgcggcc
acgccgcagtgccaggacatgaatgcgctggccagccacagcggcgccgatctcgccaac
tatctggtcagcctgcccgactacacctgcacctacggcttgttcgcgctggacaaaaat
ctggccgcctccatttacagcgccggcaacctcaacgccgtcgccagccgcttcgcccag
gaagccgccggctacaacgcgtcgtcgatggctctggtcaacctgaccctgtatctgcgc
gccggctattacctggccagcaccggcgcgctgccggcgctggaccccagcctgcaaagc
gcgctgcgccccggcatcaagcaactggcggcgggaacggcgctgttcgccgccaacgcc
caggcgcccaccaccgcgggcgaggtgatgacgctgatcaccaatatggcggacgaagcc
tattacctgccgtccgtccgcaccatcgtccagcgctacaccaacaccgccgccaacccc
aacgccgcgcaaagcctgcgcgaaactaccgccagccagggcttcaccggcgcgctgacc
gtgttcttctacgcccacggccgcgccaacgccgcgccgctgctgcagaacgacggcagc
tattcggcggcgctgacccaattcgtccaggccaacaaggccagcctgcttggcaccgaa
acggcctaccagctgggcgacgccacccgtgaagggttgcgcttcatgcaatatccggcg
ctgctgcccgccatcaagccgcaggccaaggccatcctcgccgccagcagcatgaccggg
gccgacaacgagctgtggctggcggcggcggaagcggtcaagtactacgacaacgccaac
tgcgccgaatacggcacctgcaatttcgaaaccaaactggccgacgccgtcctggtcaac
cgctacacctgcagccccaccatccgcatccgcgcgcaggaaatgaccacagaccagatg
cagtcgtcgtgcgcactgctgcaaaaggaagagtcctacttccaccagatgctgcaaacc
cgcaaccagccggtggccaacgacaacaacgcctcgctggaagtggtggtgttcgacgac
tacaacaattattccaagtacgccggcgtgatctacggcatctccaccgacaacggcggc
atgtacctggaaggcaacccggccgatccgggcaaccaggcccgcttcatcgcccacgag
gcctcgtggctgcgcccggcgttcaaggtgtggaacctggagcatgaatacatccattac
ctggatggccgcttcgacatgtacggcgacttctccgccgccacccagcaaccgacggtg
tggtggatagagggcctggccgagtacctgtcgctgcgcaacgacaaccagaccgccatc
gacgtcgccaagaccggcacctaccagctgagccagatctacggcaacacctacgacatg
tcggactacgtcacccgcgcctatcgctggggctatatggccacccgcttcatgttcgag
cgccaccgcgccgacatcgacgccatgctgcccctatggcgcaagggcgactacgccggc
ggctatgcggggctgatgcgccagatcggcaagcgctacgacgccgagttcgccggctgg
gcgcaaaacgccaccaccgctggccagccgccgctgccgccatccaccggcttgccggcc
tgcaacgaaggctcgccggagcggctgggcaagaattgctcgatttccggcctgtcctcc
tcctacgcggcctatgccgccatctggatgccggccggcgcgcataatctgaagctgtgg
accagcggcggcagcggcgacgtggacctctacgtagccattgaccgctacccgacgccg
gcgaactatgacttctcgtccgtctccgccggcaacgacgaatcggtcgccatcgccgcg
cctcagagcggccactggtattacctgacgctgcaggcgaagcagccgttctccggcgtg
tccgtcagcgccagctacgagtag
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