Chromobacterium phragmitis IIBBL 112-1: DK842_01840
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Entry
DK842_01840 CDS
T05549
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chri03009
]
DK842_01840
Enzymes [BR:
chri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DK842_01840
Ribosome biogenesis [BR:
chri03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DK842_01840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AXE28767
LinkDB
All DBs
Position
complement(370380..371804)
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AA seq
474 aa
AA seq
DB search
MSTKGQRNHARQPVARVKGRETSQPRQNAGRGQGQPRQGKNPSAGIQPRFPQQQGQQARR
GGQRQARDAYGNPIMPQQDGVPLFKMSRREQEQQMLSTGNRKPQYQRDSNGDVNGNVSLD
HEKRFGNKNAARPAGKGRNPAEGGRAKAEGRDDAQPKAEAKPRGDAKPKQLVQKAKKLRL
RSPSQDIKNKAQKLKEVRVDLNEIEPVRLQKALSSSGVGSRREMEEWIEAGLVLVNGKKA
SLGDKVGPHDKVTVKGDPIKLKWPDRLPRVIMYHKEEGEIVTRDDPEGRVTVFARLPQAK
SSRWVAIGRLDVNTSGLLLITTSGELANRMMHPSFEVEREYSVRVLGELTPEIMKEMTKG
VELEDGEARFDRIFQTGGQEESANQWYNVVIKEGRNREVRRMFEHFGLTVSRLMRVRFGN
IGLPPRLKRGQFYELNAAEVAAVMKWSNLTVTGGKKTGGQRRASPRKPKAARGE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaaaaggacaacgtaaccacgcgcgccaaccggtcgcgcgtgtcaaaggccgc
gagacctcgcagccgcgccagaacgccggccgcggccaaggccagccgcgccagggcaag
aacccttccgccggcatccagccgcgattcccgcagcagcaaggccaacaggcgcgccgc
ggcggccagcgccaggcgcgcgacgcttacggcaatcccatcatgccgcagcaggacggc
gtgccgctgttcaagatgagccgccgcgagcaggaacagcagatgctgtccaccggcaac
cgcaagccgcaatatcagcgcgacagcaacggcgacgtcaacggcaacgtgtcgctggat
catgaaaagcgcttcggcaacaagaacgccgcccgtccggccggcaaggggcgcaatccg
gccgaaggcggccgcgccaaggccgaggggcgggatgacgcccaacccaaggccgaagcc
aagccgcgcggcgacgccaagcccaagcaactggtgcagaaggccaagaagctgcgcctg
cgcagccccagccaggacatcaagaacaaggcgcagaagctgaaggaagtgcgcgtcgat
ctgaacgagatcgagccggtgcgtctgcagaaggcgctgtcttcgtccggcgtcggttcc
cgccgcgagatggaagagtggatcgaggccggcctggtgttggtcaacggcaagaaggcc
agcctgggcgacaaggtcggcccgcatgacaaggtgacggtcaaaggcgacccgatcaag
ctgaagtggccggaccgcctgccgcgcgtgatcatgtaccacaaggaagagggcgagatc
gtcacccgcgacgatccggaaggccgcgtcaccgtattcgcgcgcctgccgcaggcgaag
tccagccgctgggtagccatcggccgcctggacgtcaatacttccggcctgctgctgatc
acgaccagcggcgagctggccaaccgcatgatgcatcccagcttcgaagtggagcgcgag
tactcggtgcgcgtgttgggcgaattgacgccggagatcatgaaggaaatgaccaagggc
gtggagctggaagacggcgaagcgcgcttcgaccgcattttccagaccggcggccaggaa
gagtcggccaaccagtggtacaacgtggtgatcaaggaaggccgcaaccgcgaagtgcgc
cgcatgttcgaacatttcggcctgaccgtcagccgcttgatgcgcgtgcgttttggcaac
atcggcctgccgccgcggctgaagcgcggccagttctacgagctgaacgccgccgaggtg
gccgccgtgatgaaatggtccaatttgaccgtgaccggcggcaagaaaaccggcggccaa
cgccgcgcctcgccccgcaagcccaaggccgcgcgcggcgagtaa
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