Chromobacterium phragmitis IIBBL 112-1: DK842_01880
Help
Entry
DK842_01880 CDS
T05549
Name
(GenBank) PLP-dependent transferase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00260
Glycine, serine and threonine metabolism
chri00270
Cysteine and methionine metabolism
chri00450
Selenocompound metabolism
chri00670
One carbon pool by folate
chri01100
Metabolic pathways
chri01110
Biosynthesis of secondary metabolites
chri01230
Biosynthesis of amino acids
Module
chri_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DK842_01880
00270 Cysteine and methionine metabolism
DK842_01880
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DK842_01880
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DK842_01880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chri04147
]
DK842_01880
Enzymes [BR:
chri01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
DK842_01880
Exosome [BR:
chri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DK842_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AXE28775
LinkDB
All DBs
Position
complement(376467..377609)
Genome browser
AA seq
380 aa
AA seq
DB search
MTDFHTLAVTAGAHEDPFGAVMPPIYATSTYRQSAPGEHTGYEYSRSQNPTREALERAVA
ELEGGVRGYAFGSGLAAISTVLELLPAGSHLIAVNDLYGGTYRLFEKVRKASANLEVTYV
ASEDSAALEAAIRPNTRMIWVETPSNPLNQLVDLQQVSAIARRHDLIGVVDNTFASPVNQ
RPLDFGFDIVVHSATKYLNGHSDVVAGVAVVSRDKPELAEQLAFLHNAVGAILDAFPSFL
VLRGLRTLALRIEQHNRNGLAIARWLEAQPWVEKVLYPGLESHPQHELARRQMQGYGGIV
SFYLKGDVKAFLSRLKLFTLAESLGGVESLVCLPAAMTHASIPAERRAALGIHDNLIRLS
VGVEGEAALIADLERAQRDS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttccacaccctggccgtgaccgcaggcgcccacgaggatccgttcggcgcg
gtgatgccgccgatctacgccacctctacctaccgccagagcgcgccgggcgaacatacc
ggctacgagtattcccgctcgcagaacccgacccgcgaagcgctggagcgcgcggtggcc
gaactggaaggcggcgtccgcggctatgctttcggttccggcctggcggcgatttccacc
gtgctggagctgctgccggccggcagccacctgatcgcggtcaatgatctgtacggcggc
acctaccgcctgttcgagaaggtgcgcaaggccagcgccaatctggaagtgacctatgtc
gcttccgaggacagcgccgcgctggaagccgcgatccggccgaacacgcggatgatctgg
gtggaaacgccgtccaatccgctgaatcagctggtggatctgcagcaggtgtccgccatc
gctcgccgccatgatctgatcggcgtggtcgacaacaccttcgcctcgccggtcaaccag
cggccgctggatttcggcttcgacatcgtcgtccactccgccaccaagtatctgaacggc
cactcagacgtggtggccggcgtggccgtggtcagccgcgacaagccggaactggccgag
cagctggccttcttgcacaacgcggtgggcgccattctggatgccttccccagcttcctg
gtgctgcgcggcctgcgcacgctggcgctgcgcatcgagcagcacaaccgcaacggcctg
gccatcgcgcgctggctggaggcgcagccctgggtggagaaagtgttgtatccgggcctg
gaaagccatccgcagcatgagctggcgcgccgccagatgcagggctacggcggcatcgta
tcgttctacctgaaaggcgacgtcaaggccttcctgtccaggctgaaactgttcacgctg
gccgagagcctgggcggcgtcgagagtctggtctgcctgccggcggcgatgacccatgcg
tcgattccggcggagcgccgcgcggcgctgggcatccatgacaatctgatccgcctgtcg
gtcggcgtcgagggcgaagcggcgctgattgcggatctggagcgggcgcagcgggacagc
tga
DBGET
integrated database retrieval system