Chromobacterium phragmitis IIBBL 112-1: DK842_02340
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Entry
DK842_02340 CDS
T05549
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chri03400
]
DK842_02340
Enzymes [BR:
chri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DK842_02340
DNA repair and recombination proteins [BR:
chri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DK842_02340
Prokaryotic type
DK842_02340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AXE28856
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All DBs
Position
complement(470065..471480)
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AA seq
471 aa
AA seq
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MSKTIGTALVWLRRDLRLDDHAAFYHALKHSRAALPVFVFDASILDALPRDDRRVDFIHQ
SLAALKAELNQLGGDLLIRYGQPRDEIPRLAAELGAEAVFCNRDYEPAARARDAEVAEKL
AERGIAFHGCKDQVVFETDEVLTGAGKPFAVFTPYKNAWLKKLTPFHLQAYPVRRYLDAL
LPRAPEAMPSLADIGFSPSGLAALPVRAGADGAEALFADFSRRIAHYKTMRDYPGVKGVS
YLSVHLRFGTISIRRLAAYAWHDGGEGAMTWLSELIWRDFYQQVLWHRPDVVEHAFKPEY
DALPFPNDAEWFEAWKNGQTGYPLVDAAMRQLNHSGYMHNRLRMVAASFLVKDLLIDWRW
GERYFAEKLLDFDLAANNGGWQWAASTGCDAQPYFRIFNPVSQSEKFDPDGRFIRRYVPE
LAALPDKLIHGPWLAKPEQLMDAGVRLGRDYPHPIVDHAVQRERALALFKR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacgataggcacggcgctggtctggttgcgccgcgatttgcggctggacgac
catgccgctttttaccacgcgctgaagcacagccgggcggcgctgccggtgttcgtgttc
gacgcctcgattttggacgcgttgccgcgcgacgaccgccgcgtcgacttcattcatcaa
agcttggcggcgctgaaggcggagttgaatcagctgggcggcgacctgctgatccgctat
gggcagccgcgggacgagataccgcggctggcggcggagctgggcgcggaggcggtgttc
tgcaaccgcgattacgagccggccgcgcgcgcgcgcgacgcggaggtggcggagaagctg
gccgagcgcggcatcgcttttcatggctgcaaggatcaggtggtctttgaaaccgacgag
gtgctgaccggcgccggcaagccgtttgccgtattcacgccgtacaagaacgcctggttg
aagaaactgacgcccttccatctgcaggcctatccggtgcggcgctatctggacgcgctg
ctgccgcgcgcgcccgaggccatgccgtcgctggccgacatcggctttagccccagcggc
ctggccgcgctgccggtgcgggcgggcgccgacggggcagaggccctgttcgccgatttt
tcccgccgcatcgcccattacaagaccatgcgcgactaccccggcgtcaagggcgtgtcc
tatctcagcgtccatctgcgcttcggcaccatttccatccgccggctggcggcctatgcc
tggcatgacggcggcgagggggcgatgacttggctgagcgagctgatctggcgcgatttc
taccagcaagtgctgtggcaccggccggacgtggtggaacacgcgttcaagccggagtat
gacgcgctgcctttccccaatgacgcggaatggttcgaggcctggaaaaacgggcaaacc
ggctacccgctggtggacgcggcgatgcggcagctgaaccatagcggctatatgcacaac
cggctgcgcatggtggcggccagcttcctggtcaaggatctgctgatcgactggcgctgg
ggcgagcgctacttcgccgaaaagctattggacttcgacctggcggccaataacggcggc
tggcaatgggcggccagcaccggctgcgacgcccagccttatttccgcatcttcaacccg
gtgagccagagcgagaaattcgacccggacggccgcttcatccgccgttacgtgccggag
ctggcggcgctgccggacaagctgatccacgggccgtggctggccaagccggaacagttg
atggacgccggcgtgcggctggggcgggactacccgcatcccattgtcgatcacgccgtt
cagcgcgagcgggcgctggccctgttcaagcgctga
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