Chromobacterium phragmitis IIBBL 112-1: DK842_04170
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Entry
DK842_04170 CDS
T05549
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00240
Pyrimidine metabolism
chri00250
Alanine, aspartate and glutamate metabolism
chri01100
Metabolic pathways
chri01240
Biosynthesis of cofactors
Module
chri_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DK842_04170 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DK842_04170 (carB)
Enzymes [BR:
chri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DK842_04170 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
CPSase_L_D3
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_5
RimK
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AXE29180
UniProt:
A0A344UGY8
LinkDB
All DBs
Position
complement(835891..839100)
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AA seq
1069 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPDM
ADVTYIEPISWPVVEKIIAKERPDAILPTMGGQTALNCALDLAKHGVLEKYKVELIGATE
DAIDKAEDRGRFKEAMAKIGLSCPLSFVCHTMEESLEAQTKVGFPTLIRPSFTMGGSGGG
IAYNKEEFLAICERGFEASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFATNPATGEMIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGATPASFEPSIDYVVTKIP
RFAFEKFPQADDRLTTQMKSVGEVMAMGRTLQESMQKALRGLETGLSGFDSVTTDEAAIR
HELGAPGPERILYVADAFRIGMSRDDIHAVSKIDHWFLAQIEDIVGEEKALAGRKVEEME
YSELRRLKRKGFSDRRLGELLSTDQAAVRAKRWSLKLHPVYKRVDTCAAEFATNTAYMYS
SYEEECESNPSDRKKVMVLGGGPNRIGQGIEFDYCCVHAALSLRESGFETIMVNCNPETV
STDYDTSDRLYFEPLTLEDVLEICRIEKPFGVIVQYGGQTPLKLARALEANGVPIIGTSP
DMIDAAEDRERFQKLLNELGLKQPPNRTARAPAEAMKLAEEIGYPLVVRPSYVLGGRAME
IVHEPADLERYMREAVKVSNDSPVLLDRFLNDAIEVDVDCVSDGEQVVIGGIMQHVEQAG
VHSGDSACSLPAYSLFPAMQDEIRRQTVAMARALNVVGLMNVQFAIQGETIYVLEVNPRA
SRTVPFVSKVTSAPLAKIAARAMAGISLAEQGFTKEVIPPFYAVKEAVFPFIKFPGVDTI
LGPEMKSTGEVMGVGKTFAEAYVKAQLGAGDRLPKTGKVFLSVRDGDKNGAVDVARELQR
LGFGVCCTRGTAKHLADAGLIVQVVNKVNEGRPHIVDMIKNGEVDLVINTVDEKRTAIQD
SHSIRRSALQARVPQYTTLSAAKAVCVGMSHAEAFDVYSVQQLHAQIAG
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgtaccgacatcaaaagcattctgatcattggcgccggcccgatcgtcatc
ggccaagcctgcgagttcgactactccggcgcccaggcctgcaaggcgctgcgcgaggag
ggctacaaagtcatcctggtcaactccaatccggccaccatcatgaccgacccggacatg
gccgacgtcacctatatcgagcccatcagctggccggtggtggaaaagatcatcgccaag
gagcgtccggacgccattctgccgaccatgggcggccagaccgcgctgaactgcgcgctg
gacctggccaagcacggcgtcctcgaaaaatataaagtcgagctgatcggcgccaccgaa
gacgccatcgacaaggccgaggaccgcggccgtttcaaggaggcgatggccaagatcggc
ctgtcctgcccgctgtccttcgtctgccacaccatggaagagtcgctggaggcgcagacc
aaggtcggcttcccgacgctgatccgcccgtccttcaccatgggcggctccggcggcggc
atcgcctacaacaaggaagaattcctggcgatctgcgagcgcggtttcgaagcttccccc
acccatgagctgctgatcgagcaatcggtgctgggctggaaggaatacgagatggaagtc
gttcgcgacaagaacgacaactgcatcatcatctgctccatcgaaaacttcgatccgatg
ggcgtgcacaccggcgactccatcaccgtggccccggcgcagaccttgaccgacaaggaa
taccagatcatgcgcaacgcctccttggcggtgctgcgcgagatcggcgtggataccggc
ggctccaatgtgcagttcgccaccaatccggccaccggcgagatgattgtcatcgaaatg
aacccgcgcgtgtcgcgttcgtcagcgctggcgtccaaggccaccggcttcccgatcgcc
aagatcgccgccaagctggcggtcggcttcacgctggacgaactgaagaacgacatcacc
ggcggcgccaccccggcctcgttcgagccgtccatcgactacgtggtcaccaagattccg
cgcttcgccttcgagaaattcccgcaggccgacgaccgcctgaccacccagatgaaatcg
gtgggcgaggtgatggccatgggccgcacgctgcaggaatcgatgcagaaggcgctgcgc
ggcctggaaaccggcctgtccggcttcgactcggtcacgactgacgaagccgccatccgc
cacgaactgggggcgccgggaccggagcgcatcctgtacgtggccgacgccttccgcatc
ggcatgagccgcgacgacatccacgcagtgagcaagatcgatcactggttcctggcccag
atcgaagacatcgtcggcgaagaaaaagcgctggccggccgcaaggtcgaggagatggaa
tacagcgaattgcgccgcttgaagcgcaagggcttctccgaccgccgcctgggcgagctg
ctctccaccgaccaggccgccgtgcgcgccaagcgctggagcctgaagctgcatccggtg
tacaagcgtgtggacacctgcgccgccgagttcgccaccaatactgcttacatgtactcc
agctacgaggaggagtgcgagtccaatccgtccgaccgcaagaaggtgatggtgctgggc
ggcgggccgaaccgcatcggccagggcatcgagttcgactactgctgcgtgcacgcggct
ttgagcctgcgcgaatccggcttcgagaccatcatggtcaactgcaacccggaaaccgtg
tccaccgactacgacacttcggaccgtctgtatttcgagccgctgacgctggaggacgtg
ctggaaatctgccgcatcgagaagccgttcggcgtgatcgtgcagtacggcggccagacc
ccgctgaagctggcgcgcgcgctggaagccaacggcgtgcccatcatcggcacctcgccg
gacatgatcgacgccgccgaggaccgcgagcgtttccagaagctgctgaacgagctgggt
ctgaagcagccgccgaaccgcaccgcgcgcgcgccggccgaggcgatgaagctggccgag
gaaatcggctacccgctggtggtgcgcccgtcctacgtgctgggcggccgcgcgatggaa
atcgtccatgagccggccgatctggaacgctatatgcgcgaggcggtcaaggtatccaac
gacagcccggtgctgctggaccgcttcctcaatgacgccatcgaagtggacgtcgactgc
gtgtccgacggcgagcaagtggtgatcggcggcatcatgcagcacgtggagcaggccggc
gtccactccggcgactccgcctgctccctgccggcctacagcctgttcccggccatgcag
gatgagatccgccgccagactgtagccatggcccgcgcgctgaacgtggtgggcctgatg
aatgtgcagttcgccattcagggcgagaccatctacgtgctggaagtgaatccgcgcgcc
tcgcgcaccgtgcccttcgtctccaaggtgacctcggcgccgctggccaagatcgccgcc
cgcgccatggccggcatcagcctggccgagcagggcttcaccaaggaagtgattccgccg
ttctacgcggtgaaggaagccgtgttccccttcatcaagttcccgggcgtggacaccatt
ctggggccggaaatgaagtccaccggcgaggtgatgggcgtgggcaagaccttcgccgaa
gcctacgtcaaggcgcagctgggcgcgggcgaccgcctgcccaagaccggcaaggtgttc
ctgtcggtgcgcgacggcgacaagaacggcgcggtggacgtggcgcgcgaattgcagcgc
ctgggcttcggcgtctgctgcacccgcggcaccgccaagcatctggccgacgccggcctg
atcgtgcaggtggtgaacaaggtgaacgaaggccgcccgcacatcgtcgacatgatcaag
aacggcgaagtggatctggtgatcaataccgtggacgagaagcgcaccgcgatccaggac
agccactccatccgccgctccgcgttgcaggcgcgcgtgccgcagtacaccaccttgtcc
gccgccaaggcggtgtgcgtgggcatgagccacgccgaggccttcgatgtgtacagtgtg
cagcagctgcatgcgcagatcgccggctga
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