KEGG   Chromobacterium phragmitis IIBBL 112-1: DK842_04235
Entry
DK842_04235       CDS       T05549                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
chri  Chromobacterium phragmitis IIBBL 112-1
Pathway
chri03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:chri00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DK842_04235 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:chri02044]
    DK842_04235 (gspD)
Secretion system [BR:chri02044]
 Type II secretion system
  General secretion pathway protein
   DK842_04235 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 Arm_vescicular
Other DBs
NCBI-ProteinID: AXE29193
LinkDB
Position
complement(849208..851322)
AA seq 704 aa
MRISKLVAALALVYSCNLLAAPQNDTVMLNFVNADIETVVKAIGEISGKNFIIDPRVKGT
VNIVSSRPVPRSLSYQVLLSSLRLQGFSAVEGNGVIKIVPEADAKLHAKASKSIPRGDGD
RLITKVFALKNSNANQLVPVIRPLVSPNNTVAAYPQSNALIVTDYADNIQRIESIIESVE
SAAAGDTVVIPVLFGSAVELANSLNKLMQEGGADGGKTTILADARANVLLVRADTPGKIG
KVKSLLKVLDQPSQAGSNVRVVYLKNAQAADVAKTLRALLAGEGSPVQGRSTLSNASSSG
GSANLMANVSSGSSAGGAASAQNPAAAADNGSAAAASSSSSSPSGAGYGAMIQADSNSNA
LILNVPDPMYQNLRNVIDLLDRRRAQVYVEALVMEVSASRATKIGVQWSANFGSNGFVGN
SFPKAPSIIGKTDATNPTPLNSLVNSLTGGGLTAGIINNITVGGVQIPTLGLLAQALEEE
AQGNLVASPQLVTMDNEKAKIVIGQEVGVISATYPSGTSGSSNAPYSTYDRKTVGFGLEI
TPQISEGGTIRMKISQAADSIDPQTVTNASGPTFNRRTLDTVVTVNDGGLVALGGLTQQS
TGNTENKVPLLGDIPILGNLFKYQEKTRDKKNLMIFIRPTIIRDEIGNRAVAGERYNYVM
GDVIKSSNSKLSLDPNALIKELPQNSIRGALDALQSGGKPKAEQ
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgcgaatttccaaactcgtcgccgccctggccttggtttacagctgcaacctgctcgcc
gcgccgcaaaacgatacggtcatgctcaacttcgtcaacgccgacatcgaaacggtggtc
aaggcgataggcgagatcagcggcaagaacttcatcatcgatccgcgggtgaagggcacg
gtcaatatcgtctccagccgtccggtgccgcgctcgctgtcctatcaggtgctgctgtcg
tccttgcggttgcagggtttctccgcggtggagggcaacggcgtgatcaagatcgtgccg
gaggcggacgccaagctgcacgccaaggccagcaagagcatcccgcgcggcgacggcgac
cggctgatcaccaaggtgttcgcgttgaaaaacagcaacgccaaccaactggtgccagtg
atccggccgctggtctctcccaacaatacggtggccgcctatccgcagtccaatgcgctg
atcgtcaccgactacgccgacaacatccagcgcatcgagtccatcatcgaatcggtggag
tccgccgccgccggcgacacggtggtgatcccggtgctgttcggctcggcggtggaactg
gccaacagcctgaacaagctgatgcaggaaggcggcgccgacggcggcaagaccaccatc
ctggccgatgcgcgcgccaacgtgctgttggtgcgcgccgacacgccgggcaaaataggc
aaggtcaagagcctgctcaaggtgttggaccaacccagccaggccggctccaatgtgcgg
gtggtgtatctgaagaacgcgcaggcggcggatgtggccaagaccctgcgtgccttgctg
gcgggagagggcagcccggtgcagggacgcagcacgctgagcaacgcgtcttccagcggc
ggcagcgccaatctgatggccaatgtcagcagcggctcctccgccggcggcgccgcttcc
gcgcagaatccggccgcggcggccgacaacggctcggccgccgcggcctcgtcgtcatcg
tcctctccgtccggagcgggatacggcgcgatgatacaggcggacagcaatagcaacgcg
ctgatcctgaacgtgcctgacccgatgtaccagaatctgcgcaatgtgatcgatctgctg
gatcgtcggcgggctcaggtttacgtggaagcgctggtgatggaagtgtcggccagccgg
gcgaccaagataggcgtgcagtggtcggccaatttcggctccaacggctttgtcggcaac
agctttcccaaggcgccgtccatcataggcaaaaccgacgcgaccaatccgaccccgctg
aattcgttggtcaacagcctcaccggcggcgggctgaccgcgggcatcatcaacaacatc
accgtcggcggcgtgcagattcccaccttgggcttgctggcccaggcgctggaggaagag
gcgcagggcaatctggtggccagcccgcagctggtgaccatggacaacgaaaaagccaag
atcgtgatcggccaggaagtgggcgtgatcagcgccacttatccgtccggcaccagcggc
agctcgaacgcgccttacagcacctatgaccggaagaccgtgggcttcggccttgagatc
acgccgcagatttccgagggcggcaccatccggatgaaaatcagccaggcggcggactcc
atcgacccgcagacggtgaccaacgcctccggccccaccttcaaccgccgcacgctggac
accgtggtgacagtcaatgacggcggcctggtggctttgggcggcctgacgcagcagagc
accggcaataccgagaacaaggtgccgctgctgggcgacattcccatactgggcaacctg
ttcaagtaccaggaaaaaacccgcgacaagaagaatctgatgatcttcatccgtccgacc
atcatccgcgacgagatcggcaaccgcgcggtggccggcgaacgctacaactacgtgatg
ggagatgtgatcaagagcagcaacagcaagctgtctctggatcccaacgcgttgatcaag
gagttgccgcaaaacagcatccgcggcgcgctggacgcgctgcagagcggcggcaagccc
aaggccgagcaatga

DBGET integrated database retrieval system