Chromobacterium phragmitis IIBBL 112-1: DK842_04390
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Entry
DK842_04390 CDS
T05549
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chri03032
]
DK842_04390
03036 Chromosome and associated proteins [BR:
chri03036
]
DK842_04390
03400 DNA repair and recombination proteins [BR:
chri03400
]
DK842_04390
DNA replication proteins [BR:
chri03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DK842_04390
Chromosome and associated proteins [BR:
chri03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DK842_04390
DNA repair and recombination proteins [BR:
chri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DK842_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AXE29219
UniProt:
A0A344UH28
LinkDB
All DBs
Position
883444..883713
Genome browser
AA seq
89 aa
AA seq
DB search
MTKAELIALLSDKSGLTKADVLRVLGAFDDVLLDTLASNGEISIVAGKFKVKESAARTGR
NPKTGETIQIAAKRKVSFVASKQLKDRIA
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagccgaactgattgcccttctctccgacaagtccggcctgaccaaagccgac
gtgctgcgtgtgctgggcgctttcgacgacgtactgctggacaccctggccagcaacggc
gagatcagcatcgtggccggcaaattcaaggtgaaggaaagcgccgcccgcaccggccgc
aatccgaaaaccggcgagaccatccagattgccgccaagcgcaaggtttctttcgtcgcc
agcaaacagctgaaagaccgcatcgcctga
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