Chromobacterium phragmitis IIBBL 112-1: DK842_05245
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Entry
DK842_05245 CDS
T05549
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DK842_05245 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chri02000
]
DK842_05245 (msbA)
Enzymes [BR:
chri01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DK842_05245 (msbA)
Transporters [BR:
chri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DK842_05245 (msbA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_membrane_2
DEAD
AAA_30
ABC_ATPase
AAA_22
AAA_25
NACHT
AAA
AAA_29
NB-ARC
nSTAND3
PROCN
RNaseH_ERVK-8
DUF8012
Motif
Other DBs
NCBI-ProteinID:
AXE29359
LinkDB
All DBs
Position
complement(1067290..1069047)
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AA seq
585 aa
AA seq
DB search
MTKSGFKDSWAIYRRLLGYLLGYWKVLLLSILSMSVAALTEPAVAKLLKPLIDGGFVNKD
PQVILWVPLAIIGIYLIRGVAGFINEYTASWLTGQLVQRLRQQMFAKLVRLPARYYDENQ
SGRLMSRITNDVNQVTEAGFNVITVTVRDGLTALGMLGLMLTTDWQLTLICLLVMPGVTY
CMRLVGKRLRGLARQNQQHMAQMTQVLAESIQCQRAIKVYGGQERETARFDETAASVRRN
QVKQSAASAANTGVTQLMIACALAAILYFAGLRAQHGALTAGDFMVFLTAMLGLFAPVKR
ISSVSQAMQRGLAAAESVFAFIDEPGEPDDGVRDLGASKGQLSFDGVSFAYPNVDAPALS
DIDLVIQPGETVALVGSSGSGKTTLASLVPRFYEPSVGRLLLDGVSLTDIPLHQLRDGIA
LVSQQVELFNDTVAANIAYGRSSASREEIIEAARAANAWEFIEALPEGLETVIGENGTRL
SGGQRQRLAIARALLKNAPLLILDEATSALDTQSERLVQAALENLMKNRTTIVIAHRLST
IENASRIVVMHQGRLVEQGRHDELLAMGGMYARLHSLQFSEPQAD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagcggtttcaaggatagctgggccatttaccggcgtttgctgggttatctg
ctgggctattggaaggtgctgttgctgtccattctttcgatgtcggtggcggcgctgacc
gagcccgcggtcgccaagctgctcaagccgctgatagacggaggcttcgtcaacaaggat
ccgcaggtgatcctgtgggtgcccttggccatcatcggcatttacctgatccgcggcgtg
gccggcttcatcaatgaatacaccgccagttggctgaccgggcagctggtgcagcggttg
cggcagcagatgttcgccaagctggtgcgtttgccggcgcgctattacgacgaaaaccaa
tccgggcggctgatgtcccgcatcaccaatgacgtgaaccaagtgaccgaggcgggtttc
aacgtgatcaccgtcacggtcagggatggcctgaccgcgctgggcatgttgggcctgatg
ctgaccaccgactggcaactgacgctgatctgccttttggtgatgccgggcgtcacctac
tgcatgcgattggtcggcaagcggctgcgcggcttggcgcgccagaaccagcagcatatg
gcccagatgacccaggtgctggcggaaagcatacagtgccagcgggcgatcaaggtgtat
ggcggccaagagcgggaaacggcgcgcttcgacgagaccgcggcttcggtgcggcgcaat
caggtcaagcagagcgcggccagcgcggccaataccggcgtgacccagttgatgatcgcc
tgcgcgctggcggccatcttgtatttcgccggcctgcgcgctcagcatggcgcgttgaca
gccggcgatttcatggtgttcctgaccgcgatgctgggcctgttcgcgccggtgaagcgg
atttccagcgtgtcgcaggcgatgcagcgagggctggccgcggcggagtcggtgttcgcc
ttcatcgacgaaccgggagaaccggacgatggcgtccgcgatttgggggcaagcaagggg
cagttgagcttcgatggcgtcagcttcgcctaccctaatgtagacgcgccggcgttgtcc
gatatcgatctggtgatccagcccggcgagaccgtggcgctggtggggtcctctggcagc
ggcaagaccacgctggccagcctggtgccgcgcttttacgagccatccgtcggccgtttg
ctgctggatggcgtgtccttgactgacatcccgctgcatcagctgagggacggcatcgcg
ctggtaagccagcaggtggaactattcaacgataccgtggcagccaatatcgcctatggc
cggagcagcgcgtcgcgagaggagatcatcgaggcggcccgggcggcgaatgcctgggag
ttcatcgaggccctgccagagggcctggagacggtcatcggcgaaaacggcactcggctg
tccggcggccagcgccagcgcttggccatcgcgcgggcattgttgaagaatgcccccttg
ctgatcttggacgaggcgacatcggcgctggatacccagtcagagcgattggtgcaggcg
gcgctggagaacctgatgaagaaccgcaccaccatcgtgatcgcgcaccggctatccacc
atcgagaacgccagccgtatcgtggtgatgcatcagggccggttggtggagcaaggccgg
cacgatgaactgctggccatggggggcatgtatgcccgcctgcacagcctgcaattcagc
gagcctcaggcggactga
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