KEGG   Chromobacterium phragmitis IIBBL 112-1: DK842_05420
Entry
DK842_05420       CDS       T05549                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
chri  Chromobacterium phragmitis IIBBL 112-1
Pathway
chri03030  DNA replication
chri03410  Base excision repair
chri03420  Nucleotide excision repair
chri03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DK842_05420
   03410 Base excision repair
    DK842_05420
   03420 Nucleotide excision repair
    DK842_05420
   03440 Homologous recombination
    DK842_05420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chri03032]
    DK842_05420
   03400 DNA repair and recombination proteins [BR:chri03400]
    DK842_05420
Enzymes [BR:chri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DK842_05420
DNA replication proteins [BR:chri03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DK842_05420
DNA repair and recombination proteins [BR:chri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DK842_05420
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DK842_05420
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AXE29389
LinkDB
Position
complement(1102570..1105368)
AA seq 932 aa
MKTLLLIDGSSYLYRAFHAMPDLRSPDGRPVGAVYGMVNMLRRLEKEVEFDYSACVFDAK
GKTFRDDLYPEYKANRPSMPEELASQITAVHDVVQASGWPMLAVPGVEADDVIGTLARLG
AAAGMKVIVSTGDKDMAQLVTADVTLVNTMTNELLDEAGVKEKFGVPPNRIIDYLTLIGD
KVDNVPGVDKCGPKTAVKWLEEYGSLDAIVAQADRVGGKVGENLRAALDWLPMGRRLITI
DCEVNLATDLPHGLPGLQHGQKDKPRLAELFQDLGFRTFYREVTAGSEMPAVAQRGEDAP
AAPRGDQAQGDMFAEPAAAPSAQAVPAEGALARHYETILTDAQLDAWLAKLAAAKVVSFD
TETTSLDPMQARIVGVSFSVEAGQAAYLPLGHHYAGAPEQLPLDAALARLKPWLEDARQK
KCGQNLKYDSHVLANHGIALRGIVDDSMLASYVLESHQRHNMDDLARRHLGEDTVSYEDI
CGKGAKQIGFGEVDVDIAANYAAEDADITLRLNQHFAGQLSGDLEKVYRDIELPVAEVLF
KMERHGVLIDRDKLAAQSHQLGSQMLELEEQAYELAGQPFNLNSPKQLQEILFGKLAIPT
KGVKKTPSGGYSTDESVLEQLALDHPLPKRILEYRGLAKLKSTYTDKLPTLIYPQTGRVH
TTYAQAVAITGRLSSNDPNLQNIPVRTAEGRRVREAFIAPAGWQIVSADYSQIELRIMAH
LSDDEGMLKAFASGEDIHRATAAEVFGVDLGAVTSDQRRAAKAINFGLIYGMSAFGLAAQ
LDIERSAAQQYIDRYFMRYPGVAEYMQTTREKAREQGYVETVFGRRLYLPDIKLSNPGRR
AGAERAAINAPMQGTAADLIKLAMIAVQDWLERDGLQSKLIMQVHDELVLEVPQAELERV
KRKLPEIMAEAAKLKVPLLAEVGFGDSWEAAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgaaaacattgttattgatcgacggctcttcttatttgtaccgcgcctttcacgcgatg
cccgatttgcgttctccggatggccgcccggtgggggctgtctatggcatggtcaacatg
ctcaggcggctggagaaagaggttgagttcgattatagcgcctgcgtcttcgacgcgaag
ggcaagactttccgcgacgacctgtaccccgaatacaaggccaaccgcccgtcgatgccc
gaggagctcgcttcccagattacggcggtccacgacgtggtgcaagcttccggctggccg
atgctggcggtgccgggcgtggaggccgacgacgtgatcggcacgctggcgcgcctgggg
gcggcggccggcatgaaggtgatcgtctccaccggcgacaaggacatggcgcagctggtg
acggcggacgtcactcttgtcaacaccatgaccaacgagctgctggacgaagccggggtg
aaggaaaaattcggggtgccgccgaaccggatcatcgactacctgaccctgatcggcgac
aaagtggacaacgtgcccggcgtcgacaagtgcgggccgaagaccgcggtgaagtggctg
gaggagtacggcagcctggacgccatcgtcgcccaggccgatagggtcggcggcaaggtg
ggcgagaacctgcgcgcggcgctggactggctgccgatgggcaggcggctgatcaccatc
gattgcgaggtgaacctagcgacggacctgccgcatggcctgccgggcctgcagcatggg
cagaaagacaagccgcgcctggccgagctattccaggacctgggtttccgcaccttctac
cgcgaggtgaccgcgggctcggagatgccggcggtcgcccagcgcggcgaggacgcgccg
gccgccccgcgcggcgatcaggcccagggcgacatgttcgccgagccggccgccgcgcca
tcggcccaagccgtcccggctgaaggcgcgctggcgcgccattacgaaaccattctcacc
gacgcgcagctggatgcctggctggccaagctggcggcagccaaggtggtgtccttcgac
accgaaaccaccagcctggacccaatgcaggcgcgcatcgtcggcgtcagcttctcggtg
gaggccggccaggctgcctacctgccgctgggacaccattacgccggcgcgccggaacaa
ttgccgctggacgctgccctggccaggctgaagccgtggctggaggacgcccgccagaag
aagtgcggacagaacctgaagtacgacagccacgtgctggccaatcacggcatcgccctg
cgcggcatcgtcgatgattcgatgttggcctcctacgtgctggaaagccaccagcgccac
aatatggacgacctggcgcgccgccatctgggagaggacaccgtcagctacgaggacatc
tgcggcaagggcgccaagcagatcggtttcggcgaggtggacgtcgacatcgccgccaat
tacgcggccgaagacgccgacatcacactgcgcttgaaccagcacttcgccggccaattg
agcggcgatctggaaaaggtctaccgcgacatcgagctgccggtggccgaggtgttgttc
aagatggaacggcatggcgtgctgatcgaccgcgacaagctggccgcgcagagccaccag
ctgggcagccagatgctggagctggaggagcaggcttacgaattggccggccagcctttc
aatctgaactcgcccaagcagctgcaggaaatcctgttcggcaagttggcgatcccgacc
aagggggtcaagaagacgccgagcggcggttattccaccgacgagtcggtgctggaacaa
ctggcgctggaccacccgttgcccaaacgcatcctggaataccgcgggttggccaagctg
aagtccacgtataccgacaagctgccgacgctgatttatccacagaccggccgcgtgcac
acgacttatgcacaggcggtggcgatcactggccgtttgtccagcaacgatcccaatctg
cagaacatcccggtgcgcaccgccgagggccgccgcgtgcgcgaagccttcatcgcgccg
gccggctggcagatcgtgtcggccgactattcgcagatcgagctgcgcatcatggcccac
ctgtccgacgacgagggcatgctgaaggccttcgccagcggcgaagacatccaccgcgcc
accgcggcggaggtgttcggcgtcgatctcggcgcggtcacgtcggaccagcgccgcgcg
gccaaggcgatcaacttcggcctgatctacggcatgagcgcgtttggcctcgccgcccag
ctggacatcgagcgcagcgccgcccagcagtacatcgaccgctacttcatgcgctacccg
ggcgtggccgaatacatgcagaccacgcgcgagaaggcgcgcgagcagggctacgtggaa
accgtgttcggccgccgcctgtatttgccagacatcaagctcagcaatccgggccgccgc
gccggcgccgaacgcgcggcgatcaacgcgccgatgcagggtaccgcggccgacctgatc
aagctggcgatgatcgcggtgcaggactggctggaacgtgacggtttgcaaagcaagctg
atcatgcaagtgcacgacgaactggtgctggaggtgccgcaggccgagctggagcgggtc
aagcgcaagctgcctgagatcatggccgaggcggccaaactcaaggtgccgttgctggcc
gaggtcggtttcggcgatagctgggaagctgcgcactga

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