Chromobacterium phragmitis IIBBL 112-1: DK842_06735
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Entry
DK842_06735 CDS
T05549
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri02010
ABC transporters
chri03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DK842_06735
03070 Bacterial secretion system
DK842_06735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chri02000
]
DK842_06735
02044 Secretion system [BR:
chri02044
]
DK842_06735
Transporters [BR:
chri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DK842_06735
Secretion system [BR:
chri02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DK842_06735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
SbcC_Walker_B
TniB
AAA_21
NB-ARC
AAA_25
MeaB
Coatamer_beta_C
AAA_18
DUF87
Motif
Other DBs
NCBI-ProteinID:
AXE29620
LinkDB
All DBs
Position
complement(1427033..1429177)
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AA seq
714 aa
AA seq
DB search
MSDPISGQAAAGALAPDHGLLGLVLLAQFHGIAADPEQLSHQFGRSAEPFSETDLLLAAK
HLELKAKIVQQPLDRIGLMALPALALAANGEHFIVARCDGDKVLIHDLKQGRPAVLSLDE
LAARYDGRLLVVASRASAAGALVKFDFTWFVPAIVKYRKLLLEVLGVSFVLQLFALVTPL
FFQVVMDKVLVNRAFNTLDVIAVGLLALSVFNVVLSALRGHVFAHTTSRIDVELGARLFR
HLLALPLAYYEARRVGDTVARVRELDSIRNFLTGQALTTVLDLLFSFVFLAVMFYYSGWL
TLIVVISLPCYAAWSALLTPVLRRRLDEKFARGADNQSFLVESVGGIGTIKSMAVEPHMT
RRWDNQLAAYVAAGFRVTRLANIGQNGVQLIQKLVTVATLWLGAKLVIGGDLSVGQLIAF
NMLAGQVAAPVVRLAQLWQDFQQVGISVERLGDILNTRTELPASRAALPPIQGKIEFDQV
VFRYRPDGPEILRKLSLDIRAGEVVGIVGRSGSGKSTLTKLVQRLYVPESGRVLVDGNDL
ALADPAWLRRQIGVVLQENLLFNRSVRDNIALSDPGMSLDAVIRAAKLAGAHDFIMELAE
GYDTMVGEHGASLSGGQRQRIAIARALVCNPRILILDEATSALDYESERAVMQNMRAICQ
GRTVLIIAHRLSTVRGAHRIIAMDKGVIVEAGSHAELAQKPGGYYAHLHSLQQG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcctattagcggccaagccgcggcgggggcattagcgccggaccacggcttg
ctcggcctggtgctgctggcccagtttcacggcattgccgccgaccccgagcagctttcc
caccaattcggccgctccgccgaacccttctccgaaaccgatctcctcctcgccgccaag
catctggaactgaaggccaagatcgtccagcagccgctggaccgcatcggcctgatggcc
ttgccggcgctggcgctggcggccaatggcgagcacttcatcgtcgcccgctgcgacggc
gacaaagtcttgatccacgatctgaagcagggccgtcccgcggtgttgagcctggacgag
ctggcggcgcgctacgacggccggctgctggtggtcgcctcgcgcgcgtcggcggcgggg
gccttggtcaagttcgatttcacctggttcgtgccggccatcgtcaagtaccgcaagctg
ctgttggaggtgctgggcgtgtcctttgtgctgcagctgttcgcgctggtgacgccgctg
ttcttccaggtggtgatggacaaggtgctggtcaatcgcgccttcaacacgctggacgtg
atcgccgtcggcctgttggcgctgtcggtgttcaatgtggtgttgtccgccttgcgcggc
cacgtgttcgcccacaccaccagccgcatcgacgtggagctgggcgcgcgcttgttccgc
catctgctggcgctgccgctggcctattacgaggcgcgccgcgtcggcgatacggtggcg
cgggtgcgcgagctggacagcatccgcaacttcctcaccggccaggcgctgaccacggtg
ctggacctgctgttctccttcgtgttcctggcggtgatgttctattacagcggctggctg
acgctgatcgtggtgatctcgctgccgtgctacgccgcctggtcggcgctgttgacgccg
gtgctgcgccggcggctggacgagaagttcgcccgcggcgccgacaaccagtcctttctg
gtggagtcggtgggcggcatcggcaccatcaagtcgatggcggtggagccgcacatgacg
cggcgctgggacaaccagctggcggcctacgtggccgccggcttccgggtgacgcggctg
gccaatatcggccagaacggcgtgcagctgatccagaagctggtgacggtggccaccttg
tggctgggggccaagctggtgatcggcggcgatctgtcggtcggccagctgatcgccttc
aatatgctggccggccaggtggcggcgccagtggtgcgcctggcccagctgtggcaggac
ttccagcaggtgggcatctcggtggagcggctgggggacatcctcaacacccgcaccgag
ctgccggccagccgcgcggcgctgccgcccatccagggcaagatcgagttcgaccaagtg
gtgttccgctaccgcccggacggtccggagatcctgcgcaagctgagcctggacatccgc
gccggcgaggtggtgggcatcgtcggccgctccggttccggcaagagcacgctgaccaag
ctggtgcagcggctgtacgtgccggaatccggccgcgtgctggtggatggcaacgacctg
gccctggccgatccggcctggctgcgccgccagatcggcgtggtgctgcaggagaatctg
ctgttcaaccgcagcgtgcgcgacaacatcgcgctgtccgatccgggcatgtcgctggac
gcggtaatccgcgccgccaagctggccggcgcccacgatttcatcatggagttggccgag
ggctacgacaccatggtcggcgaacatggcgccagcctgtccggcggccagcgccagcgc
atcgccatcgcccgcgcgctggtctgcaacccgcgcatcctgatcctggacgaggccacc
agcgccttggactacgagtctgagcgcgcggtgatgcagaacatgcgcgccatctgccag
ggccgcaccgtgctgatcatcgcccaccgcctgtccaccgtgcgcggcgcccaccgcatc
atcgcgatggacaagggggtgatcgtcgaagccggcagccacgccgagctggcgcagaaa
ccgggcggctactacgcccatctccacagcctgcagcaaggataa
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