Chromobacterium phragmitis IIBBL 112-1: DK842_06995
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Entry
DK842_06995 CDS
T05549
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DK842_06995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
DUF4347
Big_3_3
Big_7
LIF-R_Ig-like
Glycos_transf_2
FbpC_C_terminal
Motif
Other DBs
NCBI-ProteinID:
AXE29664
LinkDB
All DBs
Position
complement(1483999..1491090)
Genome browser
AA seq
2363 aa
AA seq
DB search
MAWWKSSGREPAKQAARPASRLLLQALEPRMMFDGAVAASVGEAAHHVEPAHDAQHADIQ
QRHGETAAALAATAQQRDAAGERGGKADGPQVVFVESNVVNLKSLLAQLPANYQVVVLDS
SKDGLAQIAEWAQSHHGYSAIHIISHGQENDLQLGATELTTANVASHQAELAAIGQALRP
GGDILLYGCDVAEGSDGAALVNAIARESGRVTAASTNATGDASLGGDWTLEYSTDRLHVA
TLNLVDYHGLLTQPTSGTTTFDNLDGAVYNPSGSTDTATNLNGWNFVMQLGQTNNGNQSI
IVEKPSTAETVDGYSDGTIPITYLSVKPNDGSLFTLNSIGVVLNGYDSGTTGGSVQLVGY
LNGSAVSGATLTQSVGDVLQGGGTLVTFTVSGNSAFQGIDSFRLLAASGHNITGMIGVGS
INAVNFHFPGPTLTASGGSSAYSSGTGAAVTVDGSMSLSDTAASTQTSATVSITGNFHSA
EDTLAFTNDGSTMGNISGSYNSGTGVLTLTSSGSTATNAQWQAALRAVTYQDSSLSPNTS
TRTISFAITDASSNTSSTVTKTVTVAADSAPVISNLNGDSNTYYAGGSAASLDTGTAATV
SDSDTTSFNGGNVTAHFSANGQSGEDVLGISTAGTVTLSSGTSVGSTVSVGGVAIGTIAT
NGDGVSGHDLIVTLNSNATASRVGTLLTALTYRDSASGIPNTSTRTIQVTVNDGRDGTSS
ASSVTMAVSAAPVLADGGGSAAFTAGDNATSTPVAVDSAITVADNASSTLASGTVSITGN
FHSSEDVLAFTNDGSTMGNISGSYNSGTGVLTLTSAGGTATLAQWQAALRAVTYTDSAVT
PNTATRTVSFQVADGSSNSSAVLTRTVTVAATDQTPLTTASGGSAAFAAGDNATSTPVAV
DNGITVSDLDNATLASATVSITGNFHSGEDVLSFTNTSAVTYGNITASYNSGTGVLTLTS
SGATATVSQWQAALRAVKYTDSAVTPNTATRTVSFAVSDGTKTSAAATRTVTVAATDQTP
LATSSGGSAAFAAADNATSTPVAVDSGITVSDLDNTTLASATVSITGNFQSGEDALSFTN
SSAVTYGNIAASYNSGTGVLTLTSSGATATVAQWQAALRAVTYTDSAITPNTATRTVSFA
VSDGTKTSSAATRTVTVAATDQTPIATVSGASGSYTVSGTPTPVAVDSGITVSDRDNATL
ASATVSITGNFHSGEDVLAFTNGSAVTYGNIAASYNSGTGVLTLTSSGATATVAQWQAAL
RAVTYNDTAGSPNTSTRVVSFAVNDGTNNSATVTRSIAIQLPTPSVSGLTAGTDTGSSSS
DGVTSNNTPSATGTATAGSTVTVYVDGVSVGTTTANSSGAWTYNFASSLADGSHAITAMA
SSGGVNSATSSAYSVTIDTSAPSAPVVSGLTSGTDTGSSHSDGVTSNNQPTITGTAEANS
TVTVYVDGTAVGTATADGSGAWSYNLTSALTEGNHSLKATATDAAGNVSGQSSAKSITVD
TSAPNAPAGLGLSAASDTGSSHSDGVTSNNQPTITGTAEANSTVTVYVDGTAVGTATADG
SGAWSYNLASSLADGNHSLKATATDAAGNVSGQSSAKNITVDTSAPNAPAGLGLSAASDT
GSSHSDGVTSNNQPTITGTAEANSTVTVYVDGTAVGTATADSTGAWSYNLASSLADGNHS
LKATATDAAGNVSGQSSAKNITVDTSAPNAPAGLGLSAASDTGGSHSDGVTSNNQPTITG
TAEANSTVTVYVDGTAVGTATADGSGAWSYNLASSLADGNHSLKATATDAAGNVSGQSSA
KNITVDTSAPNAPAGLGLSAASDTGSSHSDGVTSNNQPTITGTAEANSTVTVYVDGTAVG
TATADSTGAWSYNLASSLADGNHSLKATATDAAGNVSGQSSAKNITVDTSAPNAPAGLGL
SAASDTGSSHSDGVTSNNQPTITGTAEANSTVTVYIDGVAVGTATADSTGAWSYNVGSAL
ADGNHSIRAMAVDAAGNISGQSASYAITVDTASPQVQSLTASGLLNTSASTVSYQVVFTK
PVASFTADALSVVSSGSARGTVASVTSLSSTSYVVELSGVGGDGSLSLTIKNNMVSDAAG
NLLKGTATAPSYQLASPVVPVSTVAPVTVTTTPTFTNTIQLPPITPNIVLAAVSGSSVST
ANNGNAIITTGQTILGSTATGLGTGILTPTFGAGDSANGSANGSAPSFISSTASNPTIAL
QVNPDLGVRPLVTGQSFTISLPPATIITRESSASLSIAARQSNGQPLPAWLRFDPASGKF
TGQAPAGWNKSISIDIQVQDKSGHHGNSHIQLNFGQRQAATPPAGKAAAAAAGKQALNQQ
FEQHGQHAFEQRLAALLEGETQG
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atggcatggtggaaatcgtcgggccgggaaccggccaaacaggctgctcggccagccagc
cgtttgcttcttcaggcgctggagccgcggatgatgttcgacggcgcggtggcggcctcg
gtgggcgaggcggcgcatcacgttgagccggcgcatgacgcgcagcatgccgacatccag
cagcggcacggcgaaacggcggcagccttggccgccaccgcgcagcagcgcgacgcggcc
ggggagcgcggcggcaaggcggatggcccgcaggtggtgttcgtcgaatccaacgtggtg
aatttgaagagcctgctcgcgcaattgccggccaactaccaagtggtggtgctggacagc
agcaaggacggtttggcgcagatcgcggagtgggcgcaaagccatcatggctacagcgcc
atccacatcatttcgcacggccaggaaaacgatctgcagctgggcgccaccgagttgacc
accgccaatgtcgccagccatcaagccgagctggccgccatcggccaggccttgcgcccc
ggcggcgatatcctgctgtatggctgcgacgtggccgaaggcagcgacggcgcggcgctg
gtcaacgcgatcgccagggaaagcggccgggtgacagccgcctccaccaacgccaccggc
gatgccagcctgggcggcgactggacgctggagtattcgaccgaccggcttcacgtggcc
acgttgaatttggtcgactatcacggcctgttgacccagccgacttccggaacgaccacc
ttcgacaacctggacggcgcagtctacaacccgtctggcagcacggacaccgcaaccaac
ctgaacggctggaatttcgtcatgcagctgggccagaccaataacggcaaccagtccatc
attgtcgagaaacccagcaccgcggaaacggtggacggctattccgacggcaccattccc
atcacctatctgagcgtcaaacccaacgacggcagtctgttcaccctcaactccatcggc
gtggtgctgaatggctacgattccggcaccactggcggcagcgtccagctggtcggctat
ctgaacggctccgcggtgtccggcgcgaccttgacccaatcggtgggcgatgtgttgcag
ggcggggggacgctggtgactttcaccgtttccggcaacagcgcctttcagggcatcgat
tccttccggctgctggcggcatcgggccacaacatcaccggcatgatcggggtgggcagc
atcaacgccgtcaacttccacttccccgggccgaccctgaccgccagcggcggcagcagc
gcctacagctccggcaccggcgcggctgtgacggtggacggcagcatgtcgctgagcgat
accgcggcctcgacccagaccagcgccacggtgtcgatcaccggcaacttccacagcgcc
gaggacacgctggccttcaccaacgacggcagcaccatggggaatatcagcggcagctac
aacagcggtaccggggtgctgacgctgacctccagcggctccaccgccaccaacgcgcaa
tggcaggcagccttgcgcgcggtgacctatcaggacagctcgctatcccccaataccagc
acccgcaccatcagtttcgccatcaccgacgccagcagcaacaccagttccacggtgacc
aagaccgtcaccgtggcggcggacagcgcgccggtgatcagcaacctgaacggcgacagc
aacacctattacgccggcggcagcgctgcgagcctggataccggcaccgcggccacggtc
agcgacagcgacaccaccagcttcaacggcggcaacgtgaccgcccacttctccgccaac
ggccagagcggcgaagacgtgctgggcatcagcaccgccggcacggtgacgctgtccagc
ggcaccagcgtgggcagcacggtatcggtaggcggcgtggccatcggcaccatcgccacc
aatggcgacggcgtcagcggccatgatttgatcgtcaccctgaacagcaacgccaccgcc
tcgcgcgtgggcacgctgttgactgcgctgacgtaccgcgacagcgcctccggcattccc
aatacttccacccgcaccatacaggtgacggtcaacgacggtcgcgacggcactagcagc
gcctccagcgtgaccatggcggtcagcgccgcgccggtgctggcggatggcggcggcagc
gcggcgttcacggccggcgacaacgccacctccacgccggtggcggtggacagcgcgatc
accgtcgcggacaacgccagctccacgctggccagcggcacggtgtccatcaccggcaat
ttccacagcagcgaggatgtgctggccttcaccaacgacggcagcaccatgggcaatatc
agcggcagctacaacagcggcaccggggtgctgacgctgacctcggccggcggcaccgcc
acgctggcgcaatggcaggcggcgttgcgggcggtgacctacaccgacagcgcggtgacg
ccgaacacggcgacgcgcactgtcagcttccaggtagcggacggcagcagcaatagtagc
gcggttctgacgcggacggtgacggtagcggcgacggaccaaacgccgctgacgacggcg
agcggcggcagcgcggcgttcgcagccggcgacaacgccacctccacgccggtggcggtg
gacaacggcatcacggtatcggatctggacaacgccacgctggccagcgcgacggtgtcg
atcaccggcaacttccacagcggcgaggatgtgctcagcttcaccaataccagcgcggtg
acctacggcaacatcacggccagctacaacagcggtaccggcgtgctgacgctgacttcc
agcggcgccaccgccaccgtttcgcaatggcaggcggcgctgcgcgcggtcaagtacacc
gacagcgcggtgacgcccaacaccgccacgcgcacggtcagcttcgcggtcagcgacggc
accaagaccagcgcggcggcgacgcgcacggtgacggtggcggccaccgatcaaacgccg
ctcgcgaccagcagcggcggcagcgcggcctttgccgccgcggacaacgccacctccacg
ccggtggcggtggacagcggcatcacggtatcggacttggacaacaccacgctggccagc
gcgacagtgtcgatcaccggcaatttccagagcggcgaagatgcgctgagcttcaccaac
agcagcgcggtgacttacggcaacatcgccgccagctacaacagcggcaccggcgtgctg
acgctgacttccagcggcgccaccgccacggttgcgcaatggcaggcggcgttgcgcgcg
gtgacttacaccgacagcgcgatcacgccgaacacggcgacgcggactgtgagcttcgcg
gtcagcgacggcaccaagaccagttcggcggcgacgcgcacggtgacggtggcggccaca
gaccagacgccgatcgccaccgtgtccggcgccagcggcagctataccgtcagcggcacg
ccgacgccggtggcggtggacagcggcatcaccgtgtcggaccgggacaacgccacgctg
gccagcgcgacggtgtcgatcaccggcaacttccacagcggcgaggatgtgctggcgttc
accaatggcagcgcggtgacttacgggaacatcgccgccagctacaacagcggcaccggc
gtgctgacgctgacctccagcggcgcgacggcgacggtggcgcaatggcaggcggcgctg
cgggcggtgacctacaacgacaccgccggctcgccgaatacctccacccgggtggtcagc
ttcgcagtcaacgacggcaccaacaacagcgccacggtcacccgcagcatcgcgatccag
ttgcccacgcccagcgtcagcggattgacggcgggcaccgataccggctccagcagctcc
gacggcgtcaccagcaacaacacgccgtccgcgaccggcaccgcgacggcaggcagcacg
gtcaccgtctatgtcgatggcgtcagcgtcggcaccaccaccgccaacagttccggcgcc
tggacttacaacttcgcttccagcctggccgacggcagccatgcgatcacggcgatggcg
agcagcggcggcgtcaacagcgccacttcgtcagcgtattcggtgacgatcgacacctca
gcccccagcgcgccggttgtgagcggcctcaccagcggcacggacaccggcagcagccac
agcgacggcgtcaccagcaacaaccagccgacgatcaccggcaccgcggaagcgaacagc
acggtgacggtgtacgtggacgggacggcggtgggcacggcgacggcggacggcagcggc
gcgtggagctacaacctgaccagtgccctgaccgaaggcaaccacagcctcaaggcgacg
gcgaccgacgcggcgggcaatgtcagcggccagtcctcggccaagagcatcaccgtcgat
accagcgcgcccaatgcgccggccggcctgggcctgagcgcggccagcgacaccggcagc
agccacagcgacggcgtcaccagcaacaaccagccgacgatcaccggcaccgcggaggcg
aacagcacggtgacggtgtacgtggacgggacggcggtgggcacggcgacggcggacggc
agcggcgcgtggagctacaacctggccagcagcctggcggacggcaaccacagcctcaag
gcgacggcgaccgacgctgcgggcaatgtcagcggccagtcctcggccaagaacatcacc
gtcgataccagcgcgcccaacgcgccggccggcctgggcctgagcgcggccagcgacacc
ggcagcagccacagcgacggcgtcaccagcaacaaccagccgacgatcaccggcaccgcg
gaagcgaacagcacggtgacggtgtacgtggacgggacggcggtgggcaccgcgaccgct
gacagcaccggcgcgtggagctacaacctggccagcagcctggcggacggcaaccacagc
ctcaaggcgacggcgaccgatgcggcgggcaatgtcagcggccagtcctcggccaagaac
atcaccgtcgataccagcgcgcccaacgcgccggccggcctgggcctgagcgcggccagc
gacaccggcggcagccacagcgacggcgtcaccagcaacaaccagccgacgatcaccggc
accgcggaggcgaacagcacggtgacggtgtacgtggacgggacggcggtgggcacggcg
acggcggacggcagcggcgcgtggagctacaacctggccagcagcctggcggacggcaac
cacagcctcaaggcgacggcgaccgatgcggcgggcaatgtcagcggccagtcctcggcc
aagaacatcaccgtcgataccagcgcgcccaacgcgccggccggcctgggcctgagcgcg
gccagcgacaccggcagcagccacagcgacggcgtcaccagcaacaaccagccgacgatc
accggcaccgcggaagcgaacagcacggtgacggtgtacgtggacgggacggcggtgggc
accgcgaccgctgacagcaccggcgcgtggagctacaacctggccagcagcctggcggac
ggcaaccacagcctcaaggcgacggcgaccgatgcggcgggcaatgtcagcggccagtcc
tcggccaagaacatcaccgtcgataccagcgcgcccaacgcgccggccggcctgggcctg
agcgcggccagcgacaccggcagcagccacagcgacggcgtcaccagcaacaaccagccg
acgatcaccggcaccgcggaagcgaacagcacggtgacggtgtacatcgacggcgtggca
gtcggcaccgcgaccgccgacagcaccggcgcatggagctataacgtcggcagcgcattg
gcggacggcaatcacagcattcgcgccatggcagtggatgcggccggcaacatcagcggc
cagtcggcgagctacgccatcacggtggacaccgcctcgccgcaggtgcagagccttacg
gcatccggcttgctgaatacttcggccagcaccgtgtcttaccaagtggtattcaccaag
ccggtcgcttcgttcactgccgacgcgctaagcgtggtgagcagcggcagcgcgcgcggc
acggtagccagcgtcacgtcgctcagttcgaccagctacgttgtcgagttgtcgggagtc
ggcggcgatggatccttgtcattgacgatcaagaacaatatggtcagcgacgccgccggc
aatctgttgaagggaaccgcgactgcgccgtcctaccagttggcctctccagtggtgccg
gtcagcacggttgcgccggttacggtgacgaccacgcctaccttcaccaacaccatacaa
ctgccacccattacgcccaacatcgtactggcggctgtgagcggaagttccgtctccacc
gcgaataacggcaatgcgatcatcactacgggtcagaccatcctgggctccactgccacg
ggattgggcacgggcatcttgacgccgactttcggcgccggcgacagcgccaacggcagc
gccaacggcagcgcgccgtctttcatcagcagcacagccagcaacccgaccatcgcgctg
caggtgaatccggatctgggggtgcggccgctggtgaccgggcagtcgttcaccatttcc
ctgccgccggccaccatcattacgcgggagtcttccgccagcctgagcatcgccgcccgg
cagagcaatggccagccgctgccagcctggctgaggtttgatccggcatccggcaaattc
accggacaggcgccggcgggctggaacaagtccatttcgatagacatccaggtgcaggac
aagagcggccaccatggcaatagccacatccagctcaatttcggccagcggcaggccgcc
acgccgccggctggcaaagcggctgccgcggcggcaggcaagcaggcgctcaaccagcag
ttcgagcaacatggccaacatgcattcgagcaacgcctggcagcattgttggagggggag
acgcaaggatga
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