Chromobacterium phragmitis IIBBL 112-1: DK842_07380
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Entry
DK842_07380 CDS
T05549
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chri03009
]
DK842_07380
Enzymes [BR:
chri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DK842_07380
Ribosome biogenesis [BR:
chri03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DK842_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF4423
Motif
Other DBs
NCBI-ProteinID:
AXE29725
LinkDB
All DBs
Position
complement(1564796..1565500)
Genome browser
AA seq
234 aa
AA seq
DB search
MELYRLLQQQGFGGRKECRQLIEYGLVEVNGEVVDNYRAQFELADIASLAVDDEPWPLVR
GPLYLLLHKPANYETSHKPNCHPSIYRLLPDQFSNLDISAVGRLDVDTTGLILLSNDGQF
IHALSSPKKLVPKVYRATLKHEATPELIAKLQSGVYLNDEAREFAADSVEQLDAHTILLT
ITEGKYHQVKRMVAAASNRVEALHRESLGAIVLGDLPAGEWRHLTSAELAAFGF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggaactctatcgactgttgcaacaacaaggcttcggcggccgcaaggaatgccgccag
ctgatcgaatacggactggtggaagtgaacggcgaggtggtggacaactaccgcgcccag
ttcgagctggccgacatcgccagcctggcggtggacgacgaaccgtggccgctggtgcgc
ggcccgctgtatctcttgctgcacaagccggccaattatgaaacctcgcacaagccgaac
tgccatcccagcatctaccggctgttgccggaccagttttccaatctggacatcagcgcg
gtggggcggttggacgtggacaccaccgggctgatcctgttgtccaacgacggccagttc
atccacgcgctttcctcgcccaagaaactggtgcccaaggtctaccgcgccacgctgaag
cacgaggcgacgccggagctgatcgccaagctgcagagcggcgtgtatctcaacgacgag
gcgcgcgagttcgcggccgacagcgtggagcagctcgacgcccacaccatcttgctgacc
atcaccgagggcaagtaccaccaggtgaagcggatggtggcggcggccagcaaccgggtg
gaggcgctgcaccgcgaaagcctgggcgccatcgtcctgggcgatctgccggcgggcgag
tggcggcatttgactagcgcagaattggcggccttcggcttctga
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