Chromobacterium phragmitis IIBBL 112-1: DK842_09570
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Entry
DK842_09570 CDS
T05549
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00470
D-Amino acid metabolism
chri00550
Peptidoglycan biosynthesis
chri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DK842_09570
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DK842_09570
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chri01011
]
DK842_09570
Enzymes [BR:
chri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DK842_09570
Peptidoglycan biosynthesis and degradation proteins [BR:
chri01011
]
Precursor biosynthesis
Amino acid ligase
DK842_09570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
DAO
Thi4
YjeF_N
AlaDh_PNT_C
NAD_binding_8
2-Hacid_dh_C
Sacchrp_dh_NADP
FAD_binding_3
ThiF
TrkA_N
Pyr_redox_2
Pyr_redox_3
Pyr_redox
GARS_N
Shikimate_DH
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AXE30129
LinkDB
All DBs
Position
2029078..2030442
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AA seq
454 aa
AA seq
DB search
MDYANRHVTVVGLGGSGLAAARYLAAHGASVRVADAKPSAERLAELERHLPGVEVIVGAF
DDATFAGADLLVVSPGVPLANPAIADFRRAGGEVVGDIEILARAIRGDGSKVIAITGSNG
KSTVTSLVGHLCEAAGLDTVVAGNIGLAVLEAQLEREQSGKRPDVWVLELSSFQLESTFT
LQADAATVLNISEDHLDRYADLLDYAHAKTRVFNGTGAQILNKDDALVRAMVRPGHALKW
FSLQGEADYALAVEEGRYWLSVQGEKVFDCAEMQLQGLHNAANAMAGLGLCQAIGLSLDT
LLQGLKTFRGLEHRVELVDEFGGVAFIDDSKGTNVGATEAALNGMTRPVVLIAGGDGKGQ
DFAPLRPACQRIARAALLIGRDADKIEQALGGSGLTLERCGTLEEATRRAAAMAQPGDVV
LLSPACASLDMFRNYAHRAQVFIDTVAAVKAERA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggattacgccaatcgacatgtgacggtggtggggctggggggctcgggcctcgcggcc
gcgcgctacctggccgcccacggcgcgagcgtgcgcgtggccgacgccaaaccgtccgcc
gagcggctggccgagctggagcgccatctgccgggcgtagaggtgattgtcggcgcgttc
gacgacgccaccttcgccggcgccgacctgctggtggtcagccccggcgtgccgttggcc
aatccggccatcgcggacttccgccgcgccggcggcgaagtggtcggcgatatcgaaatc
ctggcgcgggcgatccggggcgacggcagcaaggtgatcgccatcaccggctccaacggt
aagagcacggtcaccagcctggtgggccatttgtgcgaggccgccggactggacaccgtc
gtcgccggcaacatcggcctggcggtgctggaagcgcagctggaacgcgagcagagcggc
aagcgccccgatgtgtgggtgctggagctgtccagtttccagctggagtcgacattcacg
ctgcaggccgacgccgccacggtgctgaatatttccgaggaccacctcgaccgttacgca
gatttgctggactacgcgcacgccaagacccgggtattcaacggcacgggcgcgcagata
ttgaacaaggacgatgcgctggtgcgcgccatggtccgccccggccatgcgctgaagtgg
ttctcgctgcaaggcgaggccgattacgcgctggccgtggaagagggccgctattggctt
agcgtgcagggcgagaaagtgttcgactgcgccgagatgcagctgcaaggcctgcacaac
gccgccaatgcgatggccgggctgggcctgtgccaagcgataggcctgtcgctggacacg
ctgctgcagggattgaaaaccttccgcggactcgagcatcgcgtcgagctggtagacgaa
ttcggcggtgtcgcgtttatcgatgattccaagggcaccaatgtcggcgccactgaggcg
gcgctgaatggcatgacccgccccgtggtgctgatcgccggcggcgacggcaagggccag
gatttcgcgcccttgaggccggcgtgccagcgcatcgcgcgcgcggcgctgctgatcggc
cgcgacgcggacaagattgagcaggcgctggggggaagcgggctcacgctggagcgctgc
ggcacgctggaggaggcaacccgccgcgcggcggcgatggcccagccgggcgacgtggtg
ctgctgtcgcctgcttgcgccagcctggacatgttccggaattatgcgcatcgggcgcag
gtgttcatcgataccgtcgccgcggtgaaggcggagcgggcatga
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