Chromobacterium phragmitis IIBBL 112-1: DK842_10320
Help
Entry
DK842_10320 CDS
T05549
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chri03021
]
DK842_10320 (rpoH)
Transcription machinery [BR:
chri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DK842_10320 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
IF2_N
Sigma70_r3
HTH_PafC
UCR_14kD
Glyco_hydro_77
FrhB_FdhB_C
LisH_2
Motif
Other DBs
NCBI-ProteinID:
AXE30266
UniProt:
A0A344UK62
LinkDB
All DBs
Position
complement(2185339..2186202)
Genome browser
AA seq
287 aa
AA seq
DB search
MNTTFALPVPSTSGSLEQYIQAVNSIPMLTPEQETELATRFQQENDLEAARQMVLSHLRV
VVSVSRGYAGYGLQQADLIQEGNIGLMKAVKRFEPGRGVRLFSFAIHWIKAEIHEFILRN
WRLVRIATTKPQRKLFFNLRSMKSGFSALSEQEAKSIAEDLGVKPEEVREMEIRMTGQDV
SLLADNDDEDSYAPIDWLADSHSEPTRALERRAFDHLQSEGLEYALSTLDARSRRIVEAR
WLADDSGATLHELAAEFGVSAERIRQIEAKALGKMKAALSEGVVLDQ
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacatttgcccttccggtcccgtcgaccagcggcagcctggagcagtacatc
caggccgtgaacagcattcccatgctgacgccggaacaggaaaccgagctcgcgacccgt
ttccagcaggaaaacgacctggaagcggcgcggcagatggtgctgtcgcacctgcgcgtg
gtggtgtccgtctcgcgcggctacgccggctacggcctgcagcaggccgatctgatccag
gagggcaatatcggcctgatgaaggccgtgaagcgcttcgagccgggccgcggcgtgcgc
ctgttctcgttcgccatccactggatcaaggccgagatccacgaattcatcctgcgcaac
tggcgtttggtgcgcatcgccaccaccaagccacagcgcaagctgttcttcaacctgcgc
agcatgaagagcggcttctccgcactgtccgagcaggaagccaaaagcatcgccgaagac
ctgggcgtcaagcccgaggaagtccgcgagatggagattcgcatgaccggccaggatgtg
tcgctgctggccgacaacgacgatgaggacagctacgcgccgatcgattggctggccgac
agccacagcgagccgacccgcgcgctggaacgccgcgccttcgaccatctgcagtcggaa
ggcctggaatacgcgctgtccacgctggacgcgcgcagccgccgcatcgtggaagcgcgc
tggctggccgacgacagcggcgccacgctgcacgagttggccgccgagttcggcgtctcc
gccgaacgcatccgccagatcgaagccaaggcgctgggcaagatgaaagccgcgctcagc
gaaggcgtggtgctggatcaataa
DBGET
integrated database retrieval system
