KEGG   Chromobacterium phragmitis IIBBL 112-1: DK842_11665
Entry
DK842_11665       CDS       T05549                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
chri  Chromobacterium phragmitis IIBBL 112-1
Pathway
chri03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:chri00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DK842_11665
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:chri02044]
    DK842_11665
Secretion system [BR:chri02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DK842_11665
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 YabP DUF3540 Sarcoglycan_1 Gp5_trimer_C
Other DBs
NCBI-ProteinID: AXE30496
LinkDB
Position
complement(2440838..2443591)
AA seq 917 aa
MDLTSLLASFASAFNQDQRLLTLELGGGHVAAEQLLPQSLDGEEGVSQAYRHVVTCLSPD
GAIELKTLLGQSARIGIADPAGRESLRCGVVSQARLLGSDGGFSQYQLTIEPPIALLRHR
RTSRVFQDMTVPDIVQQIVHEHQAANPVFARAQALEFKVGPAQPRSYCLQYREDDFSFIV
RLLHEEGYAWRFEHLDGDSPQVKLAVFDDVYSLPPAEVERVRFHRSDATEEEDGLTDWSA
SRRIVPGNVALATFDYQPVSTQHTGDSSQIDQGQGGQALQSSLQDYDPQSLYYAGDAEQL
SHYARLRQQAHDRLAKQFEGAGSIRGLTAGQWFRLDDHPAHDGDSHEQREFVVTGQRLQA
RNNLPTDLKAILPAGEPADAPFSTQIQAQRRGIPLTPAYAGTESAKPTSLGVQTATVVGP
AGEEVHTDAQGRIKVQFHWQRPEEHPAIGAGLDDISSCWLRVAMPSAGAGWGHQFIPRIG
QEVLVDFIEGDIDRPLITGVLYNGSHPTPDFSGAGSLPANKTLSGIKSKEHQGGGYNELL
FDDTPGEVRAKLSSEPGKTQLNQGYLAHPRSNGKAQPRGEGFELRTDHHGAIRAAHGLLL
STEAQNGAGGKQLAREHAQSQLDSALSLSQALAETATGQLADAMETGPDEISSDNAKAGK
KSDGHLQHHADALKAWEAGSNTDKDGKTAKDQAGQQPLLILSGPAGIAALTEQSQTLSAG
QNLNLIAQRDANHATGRRWLHNVGQHISLFVSGVKDKVALKLIAAKGKVQVQAQSDAMEL
TADKDVTITSCKNIITVAAKEEILLTCGGGYIRIAGGNIEVHCPGQISVKGASHNLSGPT
SLSQSVADLPREKGQYDQKFKIQWQGLDIPASNLPYRLKTPDGKMLFEGITNDIGETSLS
RSQVPEGVIIEILKKKP
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggatttgaccagcctcctcgccagtttcgcctccgccttcaaccaggaccaacgcctg
ctcacgctggagctgggcggcgggcacgtcgccgccgagcagctgctgccgcaaagcctg
gacggcgaggaaggggtgtcacaggcctatcgacatgtcgtgacctgcttgtctcccgac
ggcgccatcgagctcaagaccctgctcggccaatccgcccgcatcggcatcgccgacccc
gccggccgcgagagcctgcgctgcggcgtggtcagccaggccaggctgctgggctccgac
ggcggtttttcccagtaccagctgaccatcgagccgccgatcgcgctgctgcgccatcgc
cgcacctcccgcgtgttccaggacatgacggtgccggacatcgtccagcagatcgtccac
gagcatcaggcggccaacccggtgttcgcccgcgcgcaagccctcgagttcaaggtgggg
ccggcccagccccgcagttattgcttacaatatcgcgaagacgacttcagcttcatcgtc
cgcctgctgcatgaagagggctatgcctggcgcttcgagcacctggacggagacagcccc
caggtcaagctggcggtgttcgacgacgtctacagcctgccgccggccgaagtggagcga
gtgcgcttccaccgcagcgacgccaccgaagaagaggacggcctcaccgactggagcgcc
agccgccggatcgtccccggcaacgtggcgctggccaccttcgactaccagccggtgtcc
acccagcacaccggcgacagcagccagatcgaccagggccagggcggccaggcgctgcaa
tccagcctgcaggactacgacccgcaaagtctttactacgccggcgacgccgagcagctc
agccactacgcccggctgcggcagcaggcgcacgaccggctggccaagcaattcgaaggc
gccggctccatccgtggcctcaccgccggccaatggttccgcctggacgaccacccggcg
cacgacggcgacagccacgagcagcgcgaattcgtcgtcaccggccaacgcctccaggcg
cgcaacaacctgccgaccgacctgaaagccatcctgccggccggcgaacccgccgacgcc
ccatttagcacccagatccaggcccagcgccgcggcatcccgctgaccccggcctacgcc
ggcaccgaatcggccaagcccaccagcctgggcgtgcagaccgccaccgtggtcggcccc
gccggcgaagaagtccacaccgatgcccagggccgcatcaaggtgcagttccactggcag
cggccggaagaacaccccgccatcggcgccggcctcgacgacatatcctcctgctggctg
cgcgtcgccatgccatcagccggcgccggctggggccaccagttcatcccgcgcatcggc
caggaagtgctggtcgacttcatcgaaggcgacatcgaccgcccgctgatcaccggcgtg
ctgtacaacggcagccaccccacgcccgacttcagcggcgccggcagcctgcccgccaac
aagaccctgtccggcatcaaatccaaagaacatcagggcggcggctacaacgagctgctg
ttcgacgacacccccggcgaagtgcgcgccaagctgtccagcgaaccgggcaaaacccag
ctcaaccagggctacctcgcccatccgcgcagcaacggcaaagcccagccgcgcggcgaa
ggtttcgaactgcgcaccgaccaccacggcgccatccgcgccgcccacggcctgctgctg
tccaccgaggcgcaaaacggcgccggcggcaaacagctcgccagagaacacgcgcaatcg
cagctcgactcggccctcagcctctcgcaagcgctggccgaaaccgccaccggccaactg
gccgacgccatggagaccggccccgacgagatcagctcggacaacgccaaggccggcaag
aagagcgacggccacctgcaacaccacgccgacgcgctgaaggcctgggaagcgggatcg
aacaccgacaaggacggcaaaacggcgaaagaccaagccggccagcagccgctgctgatc
ctgtccggcccggccggcatcgccgccctcaccgagcaaagccaaaccctcagcgccggg
caaaacctcaacctcatcgcccagcgcgacgccaaccacgcgaccggccggcgctggctg
cacaacgtcggccagcacatcagcctgttcgtgtcgggggtgaaagacaaggtggcgctg
aagctgatcgcggcgaagggcaaggtgcaggtgcaggcgcagagcgacgcgatggagctg
acggcggataaggatgtgacgatcacgtcctgcaaaaacatcatcaccgttgcagccaag
gaagagattctattgacttgcggcggtggctatattcgcatcgccggcggcaatatcgaa
gtgcattgcccaggccaaatcagtgtcaagggcgctagccataacctgagtggtcccacc
agcctaagccaaagcgtcgcggacttgcctcgtgaaaaagggcaatacgatcagaagttc
aagattcaatggcagggactagatatccctgccagcaacttaccttaccgactcaaaaca
ccggatggaaaaatgcttttcgaaggcataactaacgatatcggagaaacctcacttagc
cgaagccaagtgccagagggtgtgataattgaaatcctgaagaaaaaaccatga

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