Chromobacterium phragmitis IIBBL 112-1: DK842_12745
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Entry
DK842_12745 CDS
T05549
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chri03000
]
DK842_12745
Transcription factors [BR:
chri03000
]
Prokaryotic type
Other transcription factors
Others
DK842_12745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
AAA_5
AAA_16
AAA
Mg_chelatase
AAA_30
NACHT
AAA_33
AAA_22
MCM
AAA_19
ATPase_2
AAA_14
TsaE
AAA_2
AAA_18
AAA_7
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AXE30685
LinkDB
All DBs
Position
complement(2660605..2662200)
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AA seq
531 aa
AA seq
DB search
MRSKVAIGFLGTVLDNGGYGAARWRKWRPSVGICRQPQLPLARLELLHDNHHRKLAEQTA
RDIAEASPGTEVRLHALNLEDPWDFGEMYSALDDFAGRYPFDADHEDYLLHITTGTHVAQ
ICWFLLAESRRIPARLLQSSPTRQDNDFAGLVSVIDLDLARYDRIASRFAQQSEDTVAFL
KSGIATRNPRFNRMIEQIERVAARSSAPILLRGPTGAGKSQLARRLYEVKKARHQLAGRF
VEVNCATLRGDSAMSALFGHVKGAFTGALSERAGLLRGADDGLLFLDEIGELGLDEQAML
LKAIEEKRFFPFGGDREATSDFQLVCGTMRDLRQWVRDGKFREDLYARINLWNFELPALA
ERREDIEPNLEFELARHAGEQGRHARFNAEARRGYLDFALSPQARWPGNFRELSASVTRM
ATLADAGRIDDAVVDEEIQRLRREWQDEGGDSAALAPLSAERQAALDLFDRAQLEAVLRV
CRQADSLSDAGRRLFAMSRLDKANPNDADRLRKYLARFGLSWQAIRESGRV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcaaggtggcgatagggtttctgggcacggtactggacaacggcggctacggc
gcggcgcgctggcgcaaatggcggcccagcgtcggcatctgccgccagccgcagttgccg
ctggcgcggctggagctgctgcacgacaaccaccaccggaaactggcggagcagaccgcg
cgcgacatcgcggaagcgtctcccggcaccgaggtgaggctgcatgcgctgaacctggaa
gacccgtgggatttcggcgaaatgtactcggcgctggacgatttcgccggccgctacccg
ttcgacgcagaccacgaggactacctgctgcacatcaccaccggcacccacgtcgcgcag
atttgctggttcctgctggcagaatcgcgccgcatcccggcgcggctgctgcaaagctcg
ccgacccggcaggacaacgacttcgccgggctggtcagcgtgatcgatctggacctggcc
cgctacgaccgcatcgccagccgcttcgcgcagcaaagcgaggacaccgtggccttcctc
aagtccggcatcgccacccgcaacccgcgcttcaaccgcatgatcgagcagatcgagcgg
gtggccgcgcgctcgtccgcccccatcctgctgcgcggccccaccggcgccggcaagagc
cagctggctcgacgtctgtacgaggtgaaaaaggcccgccatcagctggccggccgcttc
gtcgaggtcaactgcgccaccttgcgcggcgacagcgcgatgtcggcgctgttcggccac
gtcaaaggcgccttcaccggcgcgctgagcgagcgggccggcctgctgcgcggcgctgac
gacggcctgctgttcctggacgagatcggcgaactggggctggacgagcaagcgatgctg
ctgaaggcgatcgaagaaaaacgcttctttcctttcggcggcgaccgcgaggcgaccagc
gacttccagctggtgtgcggcaccatgcgcgacctgcggcaatgggtgcgcgatggcaag
ttccgcgaggacttgtacgcgcgcatcaatctgtggaatttcgaactgcccgccctggcc
gaacggcgcgaggacatcgagcccaacctggaattcgaactggcgcgccacgccggcgag
cagggacgccacgcgcgtttcaacgccgaggcccgccgcggctacctggacttcgcgctg
tcgccgcaggcgcgctggccgggcaatttccgcgagctgtcggcatcggtgacgcggatg
gccacgctggccgacgctggccgcatcgacgacgcggtggtggacgaggaaatccagcgc
ctgcggcgcgagtggcaagatgagggcggcgactcggccgcgctcgcgccgctgagcgcg
gagcggcaagctgcgcttgacctgttcgaccgcgcgcaactggaggccgtgctgcgcgtc
tgccgccaggcggactcgctgtccgacgccggccgccgcctgttcgccatgtcgcggctg
gacaaggccaaccccaacgacgccgaccggctgcgcaaatacctggcgcgcttcggcctg
agctggcaggcgatccgagagtccggccgggtctga
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