Chromobacterium phragmitis IIBBL 112-1: DK842_12885
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Entry
DK842_12885 CDS
T05549
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00020
Citrate cycle (TCA cycle)
chri00190
Oxidative phosphorylation
chri00650
Butanoate metabolism
chri00720
Other carbon fixation pathways
chri01100
Metabolic pathways
chri01110
Biosynthesis of secondary metabolites
chri01120
Microbial metabolism in diverse environments
chri01200
Carbon metabolism
Module
chri_M00009
Citrate cycle (TCA cycle, Krebs cycle)
chri_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chri_M00149
Succinate dehydrogenase, prokaryotes
chri_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DK842_12885 (sdhA)
00650 Butanoate metabolism
DK842_12885 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
DK842_12885 (sdhA)
00720 Other carbon fixation pathways
DK842_12885 (sdhA)
Enzymes [BR:
chri01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DK842_12885 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
NAD_binding_7
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AXE30707
UniProt:
A0A344ULD6
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All DBs
Position
2689099..2690874
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AA seq
591 aa
AA seq
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MGVAVRHFDAVVVGAGGAGMRAALQLSEAGLKTAVLSKVFPTRSHTVAAQGGVSASLGNS
EPDNWHWHMYDTVKGSDWLGDQDAIEFMCREAPKVVVELEHYGMPFDRNPDGTIYQRPFG
GHMSDFGEGKPVRRACAAADRTGHAMLHALYQRNVRANTHFFVEWMALDLIRDAEGRVQG
VVAMEMETSEIVVFQAKATLFATGGAGRIFASSTNAFINTGDGLGMAARAGIPLEDMEFW
QFHPTGVAGAGVLITEGVRGEGGILRNSSGERFMERYAPNAKDLASRDVVSRAMVSEINE
GRGCGPNKDHVLLDITHLDPEVIMSKLPGIREISIKFAGVDPIKAPIPVVPTCHYQMGGI
PTNYHGEVVIQGQPVHGFYAAGEVACASVHGANRLGTNSLLDLLVFGKSSANSIIEFVKQ
QPEDLPQLAMADVERSVARVARLDNQTNGVQVHDARAEMQRVMQAHCGVFRFKDMLAEGV
DKIMQVADMVAKTEIGDKSKVFNTARIEALELENLIEVAKATMVSANARTESRGAHVRDD
APDTPETPNGRDDVNWLKHTLWFRDGNRLEYKPVNMKPLTVDTIKLKARSY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtagctgttcgtcattttgatgcggtggtcgtgggcgccggcggcgccggcatg
cgcgccgcgctgcaactgtcggaagccggtctgaagaccgccgtgctgtccaaggtgttc
ccgacccgttcccacaccgtggccgcccagggcggcgtgtccgcttcgctcggcaactcc
gagccggacaactggcactggcacatgtacgacaccgtcaaggggtcggactggctgggc
gaccaggacgcgattgaattcatgtgccgcgaagccccgaaagtggtggtggagctggag
cactacggcatgccgttcgaccgcaacccggacggcaccatctaccagcgcccgttcggc
ggccacatgtccgacttcggcgaaggcaagccggtccgccgcgcctgcgccgccgccgac
cgcaccggccatgccatgctgcacgcgctgtaccagcgcaatgtgcgcgccaacacccat
ttcttcgtggaatggatggcgctggacctgatccgcgacgccgaaggccgcgtgcagggc
gttgtcgccatggaaatggaaacgtccgagatcgtcgtgttccaggccaaggccaccctg
ttcgccaccggcggcgccggccgcatcttcgcctcgtccaccaacgctttcatcaatacc
ggcgacggcctgggcatggccgcccgcgccggcatcccgctggaagacatggagttctgg
cagttccacccgaccggcgtggccggcgcgggcgtgctgatcaccgaaggcgtgcgcggc
gaaggcggcattctgcgcaacagctccggcgagcgtttcatggagcgctacgcgccgaac
gccaaggacctggcctcccgcgacgtggtgtcgcgcgcgatggtgtccgagatcaacgaa
ggccgcggctgcggcccgaacaaggaccacgtgctgctggacatcacccacctcgacccc
gaggtgatcatgtccaagctgccgggcatccgcgaaatctcgatcaagttcgccggcgtg
gacccgatcaaggccccgatcccggtggtgccgacctgccattaccagatgggcggcatc
cccaccaattaccacggcgaagtggtgatccagggccagccggtgcacggcttctacgcc
gccggcgaagtggcgtgcgcgtcggtgcacggcgccaaccgcctgggcaccaactcgctg
ctggacctgctggtcttcggcaagagctcggccaattccatcatcgagttcgtcaagcag
cagccggaagacctgccgcagctggcgatggccgatgtggagcgctccgtcgcccgcgtc
gcccgcttggacaaccagactaacggcgtgcaggtgcatgatgcccgcgccgagatgcag
cgggtgatgcaggcgcactgcggcgtgttccgcttcaaggacatgctggccgaaggcgtg
gacaagatcatgcaggtggccgacatggtggccaagaccgagatcggcgacaagtccaag
gtgttcaataccgcccgcatcgaggcgctggagctggagaacctgatcgaagtggccaag
gccaccatggtttccgccaatgcccgcaccgagagccgcggcgcccacgtgcgcgacgac
gcgccggacaccccggaaaccccgaacggccgcgacgacgtcaactggctcaagcacacc
ttgtggttccgcgacggcaaccgtctggaatacaagccggtgaacatgaagccgctgacc
gtggatacgatcaagttgaaggcccgctcctactaa
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