Chromobacterium phragmitis IIBBL 112-1: DK842_12920
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Entry
DK842_12920 CDS
T05549
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00010
Glycolysis / Gluconeogenesis
chri00020
Citrate cycle (TCA cycle)
chri00260
Glycine, serine and threonine metabolism
chri00280
Valine, leucine and isoleucine degradation
chri00310
Lysine degradation
chri00380
Tryptophan metabolism
chri00620
Pyruvate metabolism
chri00630
Glyoxylate and dicarboxylate metabolism
chri00640
Propanoate metabolism
chri00670
One carbon pool by folate
chri00785
Lipoic acid metabolism
chri01100
Metabolic pathways
chri01110
Biosynthesis of secondary metabolites
chri01120
Microbial metabolism in diverse environments
chri01200
Carbon metabolism
chri01210
2-Oxocarboxylic acid metabolism
chri01240
Biosynthesis of cofactors
Module
chri_M00009
Citrate cycle (TCA cycle, Krebs cycle)
chri_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chri_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
chri_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DK842_12920 (lpdA)
00020 Citrate cycle (TCA cycle)
DK842_12920 (lpdA)
00620 Pyruvate metabolism
DK842_12920 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DK842_12920 (lpdA)
00640 Propanoate metabolism
DK842_12920 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DK842_12920 (lpdA)
00280 Valine, leucine and isoleucine degradation
DK842_12920 (lpdA)
00310 Lysine degradation
DK842_12920 (lpdA)
00380 Tryptophan metabolism
DK842_12920 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DK842_12920 (lpdA)
00670 One carbon pool by folate
DK842_12920 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chri04147
]
DK842_12920 (lpdA)
Enzymes [BR:
chri01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DK842_12920 (lpdA)
Exosome [BR:
chri04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DK842_12920 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
HI0933_like
FAD_binding_2
NAD_binding_8
Pyr_redox_3
FAD_oxidored
GIDA
FAD_binding_3
3HCDH_N
2-Hacid_dh_C
DAO
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
AXE30714
LinkDB
All DBs
Position
2697667..2699100
Genome browser
AA seq
477 aa
AA seq
DB search
MSQQFDVVVIGGGPGGYVAAIRAAQLGFSAACVDAFKNPEGKPSLGGTCLNVGCIPSKAL
LQSSENFHAVQHDFAKHGISVSGAKMDVGQMLSRKTDIINKNAAGIGFLFKKNKVANIHG
LAAFKGRQGDKWLIEVTDGGKVVDTLEAGHVIVATGSSPRALPGLATDNQLVLDNEGALA
LTAVPKRLGVIGAGVIGLEMGSVWKRLGAEVTILEAAPTFLAAADQQIAKEAFKTLTKDT
GLDIKLGVKIGEVKAGKKSVSVSYELNGEAVKAEFDKLIVSIGRVPNTQGLGAETVGLQL
DERGFVAVDDHCRTNLPNVWAIGDVVRGPMLAHKASEEGVAVAERIAGQKPHVDFGVIPW
VIYTSPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALGLGQAQGTVKILADAKTDRIL
GLHMIGPMVSELVSEGVVSMEFKAASEDLARIVHAHPSLSEVIHEAALAADKRALHG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacagtttgatgtggtagtgataggcggcggccccggcggctacgtcgcggcc
atccgcgcggcccagctgggcttcagcgcggcttgcgtcgacgcgttcaagaacccggaa
ggcaagccgtcgctgggcggcacctgcctgaacgtgggttgcattccgtccaaggcgctg
ctgcagtcgtcggaaaacttccacgcggtgcagcacgatttcgccaagcacggcatcagc
gtgtccggcgccaagatggacgtcggccagatgctgagccgcaagaccgacatcatcaac
aagaacgccgccggcatcggcttcctgttcaagaagaacaaggtcgccaacatccacggc
ctggccgccttcaagggccgccagggcgacaagtggctgatcgaagtcaccgacggcggc
aaggtggtggatactctggaagccggccacgtgatcgtggccaccggctccagcccgcgc
gcgctgccgggcctggccaccgacaaccagctggtgctggacaacgagggcgcgctggcg
ctgaccgcagtgccgaagcgcctgggcgtgatcggcgccggcgtgatcggcctggaaatg
ggctcggtgtggaagcgcctgggcgcggaagtgaccattctggaagccgcgccgaccttc
ctggccgccgccgaccagcagatcgccaaggaagcgttcaagacgctgaccaaggatacc
ggcctggacatcaagctgggcgtcaagatcggcgaagtgaaggccggcaagaagagcgtc
tccgtcagctacgaactgaacggcgaagcggtgaaggccgaattcgacaagctgatcgtc
tccatcggccgcgtgccgaacacccagggtctgggcgccgagacggtcggcctgcaactg
gatgagcgcggcttcgtcgccgtggacgaccactgccgcaccaatctgcccaatgtctgg
gcgatcggcgacgtggtgcgcggcccgatgctggcgcacaaggcgtcggaagagggcgtg
gcggtggccgagcgcatcgccggccagaagccgcacgtcgatttcggcgtgatcccgtgg
gtgatctacacttctccggagatcgcctgggtcggcaagaccgaagagcagctgaaggcc
gagggcgtcgagtacaagaagggcacgtcgggcttcggcgccaacggccgcgcgctgggc
ctgggccaggcgcagggcacggtgaagattttggccgacgccaagaccgaccgcatcctg
ggcctgcacatgatcggcccgatggtgtccgagctggtcagcgaaggcgtggtgtcgatg
gaattcaaggccgccagcgaagacctggcgcgcatcgtccacgcccacccgtcgttgtcg
gaagtgatccacgaagccgccctcgccgccgacaagcgcgcgttgcacggctaa
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