KEGG   Chromobacterium phragmitis IIBBL 112-1: DK842_12920
Entry
DK842_12920       CDS       T05549                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
chri  Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00010  Glycolysis / Gluconeogenesis
chri00020  Citrate cycle (TCA cycle)
chri00260  Glycine, serine and threonine metabolism
chri00280  Valine, leucine and isoleucine degradation
chri00310  Lysine degradation
chri00380  Tryptophan metabolism
chri00620  Pyruvate metabolism
chri00630  Glyoxylate and dicarboxylate metabolism
chri00640  Propanoate metabolism
chri00670  One carbon pool by folate
chri00785  Lipoic acid metabolism
chri01100  Metabolic pathways
chri01110  Biosynthesis of secondary metabolites
chri01120  Microbial metabolism in diverse environments
chri01200  Carbon metabolism
chri01210  2-Oxocarboxylic acid metabolism
chri01240  Biosynthesis of cofactors
Module
chri_M00009  Citrate cycle (TCA cycle, Krebs cycle)
chri_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chri_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
chri_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:chri00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DK842_12920 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DK842_12920 (lpdA)
   00620 Pyruvate metabolism
    DK842_12920 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DK842_12920 (lpdA)
   00640 Propanoate metabolism
    DK842_12920 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DK842_12920 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DK842_12920 (lpdA)
   00310 Lysine degradation
    DK842_12920 (lpdA)
   00380 Tryptophan metabolism
    DK842_12920 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DK842_12920 (lpdA)
   00670 One carbon pool by folate
    DK842_12920 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chri04147]
    DK842_12920 (lpdA)
Enzymes [BR:chri01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DK842_12920 (lpdA)
Exosome [BR:chri04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DK842_12920 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C HI0933_like FAD_binding_2 NAD_binding_8 Pyr_redox_3 FAD_oxidored GIDA FAD_binding_3 3HCDH_N 2-Hacid_dh_C DAO XdhC_C
Other DBs
NCBI-ProteinID: AXE30714
LinkDB
Position
2697667..2699100
AA seq 477 aa
MSQQFDVVVIGGGPGGYVAAIRAAQLGFSAACVDAFKNPEGKPSLGGTCLNVGCIPSKAL
LQSSENFHAVQHDFAKHGISVSGAKMDVGQMLSRKTDIINKNAAGIGFLFKKNKVANIHG
LAAFKGRQGDKWLIEVTDGGKVVDTLEAGHVIVATGSSPRALPGLATDNQLVLDNEGALA
LTAVPKRLGVIGAGVIGLEMGSVWKRLGAEVTILEAAPTFLAAADQQIAKEAFKTLTKDT
GLDIKLGVKIGEVKAGKKSVSVSYELNGEAVKAEFDKLIVSIGRVPNTQGLGAETVGLQL
DERGFVAVDDHCRTNLPNVWAIGDVVRGPMLAHKASEEGVAVAERIAGQKPHVDFGVIPW
VIYTSPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALGLGQAQGTVKILADAKTDRIL
GLHMIGPMVSELVSEGVVSMEFKAASEDLARIVHAHPSLSEVIHEAALAADKRALHG
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagccaacagtttgatgtggtagtgataggcggcggccccggcggctacgtcgcggcc
atccgcgcggcccagctgggcttcagcgcggcttgcgtcgacgcgttcaagaacccggaa
ggcaagccgtcgctgggcggcacctgcctgaacgtgggttgcattccgtccaaggcgctg
ctgcagtcgtcggaaaacttccacgcggtgcagcacgatttcgccaagcacggcatcagc
gtgtccggcgccaagatggacgtcggccagatgctgagccgcaagaccgacatcatcaac
aagaacgccgccggcatcggcttcctgttcaagaagaacaaggtcgccaacatccacggc
ctggccgccttcaagggccgccagggcgacaagtggctgatcgaagtcaccgacggcggc
aaggtggtggatactctggaagccggccacgtgatcgtggccaccggctccagcccgcgc
gcgctgccgggcctggccaccgacaaccagctggtgctggacaacgagggcgcgctggcg
ctgaccgcagtgccgaagcgcctgggcgtgatcggcgccggcgtgatcggcctggaaatg
ggctcggtgtggaagcgcctgggcgcggaagtgaccattctggaagccgcgccgaccttc
ctggccgccgccgaccagcagatcgccaaggaagcgttcaagacgctgaccaaggatacc
ggcctggacatcaagctgggcgtcaagatcggcgaagtgaaggccggcaagaagagcgtc
tccgtcagctacgaactgaacggcgaagcggtgaaggccgaattcgacaagctgatcgtc
tccatcggccgcgtgccgaacacccagggtctgggcgccgagacggtcggcctgcaactg
gatgagcgcggcttcgtcgccgtggacgaccactgccgcaccaatctgcccaatgtctgg
gcgatcggcgacgtggtgcgcggcccgatgctggcgcacaaggcgtcggaagagggcgtg
gcggtggccgagcgcatcgccggccagaagccgcacgtcgatttcggcgtgatcccgtgg
gtgatctacacttctccggagatcgcctgggtcggcaagaccgaagagcagctgaaggcc
gagggcgtcgagtacaagaagggcacgtcgggcttcggcgccaacggccgcgcgctgggc
ctgggccaggcgcagggcacggtgaagattttggccgacgccaagaccgaccgcatcctg
ggcctgcacatgatcggcccgatggtgtccgagctggtcagcgaaggcgtggtgtcgatg
gaattcaaggccgccagcgaagacctggcgcgcatcgtccacgcccacccgtcgttgtcg
gaagtgatccacgaagccgccctcgccgccgacaagcgcgcgttgcacggctaa

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