Chromobacterium phragmitis IIBBL 112-1: DK842_13705
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Entry
DK842_13705 CDS
T05549
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chri03019
]
DK842_13705
03016 Transfer RNA biogenesis [BR:
chri03016
]
DK842_13705
Enzymes [BR:
chri01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
DK842_13705
Messenger RNA biogenesis [BR:
chri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DK842_13705
Transfer RNA biogenesis [BR:
chri03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DK842_13705
Prokaryotic type
DK842_13705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
AXE30852
UniProt:
A0A344ULT0
LinkDB
All DBs
Position
complement(2865206..2865649)
Genome browser
AA seq
147 aa
AA seq
DB search
MKTRLLWLALTAFSLPALAAPSCRIVAGKVNQQAGMRLDAAELGDMLLKLNLDGRLPDKF
VTKRQAQSSGWRPGVNLWSVPELQGKSMGGDRFGNYEKRLPAGQWQEADLSYKGGKRGAK
RLLFSRHGQRFVTVDHYNSFIEVPSCQ
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagactattatggctcgcgctgacggcattcagcctgccggcccttgccgcc
ccctcctgtcgcatcgtcgccggcaaggtcaatcagcaagccggcatgcggctagacgcg
gccgagctgggcgacatgctgctcaagctcaatctggacggccgcctgccggacaaattc
gtcaccaagcgccaagcccaaagctcgggctggcgcccaggcgtcaacctgtggagcgtg
cccgagctgcaaggcaaatccatgggcggcgaccgcttcggcaattacgaaaagcggctc
cctgccggccaatggcaggaagccgatctaagctataaaggtggcaaacgcggcgccaag
cggctgctattcagccgccacggccagcgtttcgtcaccgtggatcattacaatagcttc
atcgaggttccctcatgccagtaa
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