Chromobacterium phragmitis IIBBL 112-1: DK842_13965
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Entry
DK842_13965 CDS
T05549
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00260
Glycine, serine and threonine metabolism
chri00460
Cyanoamino acid metabolism
chri00630
Glyoxylate and dicarboxylate metabolism
chri00670
One carbon pool by folate
chri00680
Methane metabolism
chri01100
Metabolic pathways
chri01110
Biosynthesis of secondary metabolites
chri01120
Microbial metabolism in diverse environments
chri01200
Carbon metabolism
chri01230
Biosynthesis of amino acids
chri01240
Biosynthesis of cofactors
chri04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DK842_13965 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DK842_13965 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DK842_13965 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DK842_13965 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DK842_13965 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DK842_13965 (glyA)
Enzymes [BR:
chri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DK842_13965 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AXE30897
UniProt:
A0A344ULZ6
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All DBs
Position
2914837..2916084
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AA seq
415 aa
AA seq
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MFAADQTIAKFDPELAAAIAAECQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRFYGGCEHVDVVEQLAIDRVKQLFGAEYANVQPHSGSQANQAVYFSILKPGDTVMGMN
LGHGGHLTHGSPANLSGKMFNIVAYGLNDKEEIDYDDMERVAMETKPKLIIGGASAYALR
FDFERMGQIAKKVGAYFMVDMAHYAGLVAAGLYPNPVPHADFVTSTTHKTLRGPRGGIIL
AKAEFEKSINSNVFPTLQGGPLEHVIAAKAVAFKEALQPEFKAYQEQVIKNAAIMAKTLA
ERGLRIVSGRTESHVFLVDLRAKGLTGKQADALLGRAHITVNKNAIPNDPETPFVTSGIR
IGSPAITTRGFKEAEAIEVANLVADVLDNPNDDALIARVAEKATALCHRFPVYAK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctgctgaccagacgatcgccaaattcgaccccgaactcgccgccgccattgcc
gcggaatgccaacgccaggaagatcacatcgagctgatcgcctcggaaaactacaccagc
ccggccgtcatggaagcccaaggctcccagctgaccaacaagtatgccgaaggctacccg
ggcaagcgcttctacggcggttgcgagcacgtcgacgtcgtcgagcaactggccatcgac
cgcgtcaagcagctgttcggcgccgaatacgccaacgtccagccgcactccggctcccag
gccaaccaggcggtgtacttctccatcctgaagccgggcgacaccgtgatgggcatgaac
ctgggccacggcggccacctgacccacggctctccggccaatctgtccggcaagatgttc
aacatcgtcgcctacggcctgaacgacaaggaagaaatcgactacgacgacatggagcgc
gtggcgatggaaaccaagccgaagctgatcatcggcggcgcgtccgcctacgccttgcgc
ttcgacttcgagcgcatgggccagatcgccaagaaggtcggcgcttacttcatggtcgac
atggctcactatgccggcctggtggccgcgggcctgtacccgaacccggtgccgcacgcc
gacttcgtgacctccaccacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gccaaggcggagttcgagaagagcatcaacagcaatgtgttcccgacgctgcaaggcggc
ccgctggagcacgtgatcgccgccaaggccgtcgccttcaaggaagcgctgcagccggaa
ttcaaggcgtatcaggaacaagtgatcaagaacgccgccatcatggccaagaccctggcc
gagcgcggcctgcgcatcgtgtccggccgcaccgagagccacgtgttcctggtcgacctg
cgcgccaagggcctgaccggcaagcaagccgacgcgttgctgggccgcgcccacatcacc
gtcaacaagaacgcgattccgaacgatccggaaaccccgttcgtcacctccggcatccgc
atcggctccccggccatcaccacccgcggcttcaaggaagccgaggccatcgaagtggcc
aatctggtcgccgacgtgctggacaacccgaacgacgacgcgttgatcgctcgcgtcgcc
gagaaggccaccgcgctgtgccatcgcttcccggtgtacgccaagtaa
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