Chromobacterium phragmitis IIBBL 112-1: DK842_14315
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Entry
DK842_14315 CDS
T05549
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DK842_14315
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
chri01007
]
DK842_14315
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chri03016
]
DK842_14315
Enzymes [BR:
chri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DK842_14315
Amino acid related enzymes [BR:
chri01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DK842_14315
Transfer RNA biogenesis [BR:
chri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DK842_14315
Prokaryotic type
DK842_14315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AXE30957
LinkDB
All DBs
Position
2981488..2983845
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AA seq
785 aa
AA seq
DB search
MQFSEQWLRSWVNPALNTEQLSELLTMAGLEVEETVAAAPAFSGVVIAEVKECVKHENAD
RLRVTKVDAGTGELIQIVCGAPNVAVGVRIPCALPGAVLPGDFKIKPTKMRGVESGGMLC
SGKELGVPEDVDGLMLLPADAPVGQSIRDYLGLDDQLFTLKITPNRADGLSIRGIAREVA
ALTGAELKPVAIAPVAPSIDDVRPVKIESRQACGRYLGRVVKGVDAAAATPAWMRQRLER
SGLRSISAIVDITNYILLEQGQPMHAFDLAKIEGGITVRQARAGESLLCLNEKTVELQDK
HLVIADDAKPLAMGGIMGGEHSGVTTASRDIFLESAFFAPEAIAGKARELGFGSDSSYRY
ERGVDFALQREAMERATRLVLDICGGEAGPVVEEVAELPKRQSVKLRVARVAKVLGVALS
AEQIGDILSRLSLSYTLADEVFTVQAPSFRFDIEIEEDLIEEVARVYGYNNIPADAPRSG
MRMLAQPEEKRPVDQLRHLLAGRDYQEVVSYAFVDERWERDFGGNDNAIRLQNPIASQMS
VMRSTLIGGLVDVLVGNINRKQPRVRLFEVARVFLRGEQGFEQPEKAAGLAWGPRLAEQW
GAKSERVDFFDVKADVEALLHPVKAEYRKAAHPAFHPGRCAEVWVDGKAVGVIGELHPQW
VQAYDLATAPVLFELDLAAAVARDRIKAAVVSKLQPVRRDLALLVDESVTVAQLLAAFAA
KRAQIVTDIALFDVYRGKGVAEGKKSLAFSVLMQDNSRTLTDEDVEPALQALLDAASALG
AQLRV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttccgaacaatggctgagaagctgggtcaatccggcgctgaacaccgagcaa
ctgtccgagctgctgaccatggcgggcctggaggtggaagaaaccgtcgctgccgcgccc
gctttcagcggcgtggtcatcgccgaggtgaaggaatgcgtcaagcatgagaacgccgac
cgcctgcgcgtgaccaaggtcgacgcgggcactggcgaattgatccagatcgtctgcggt
gcgcccaacgtcgccgtcggcgtgcgcattccctgcgcgctgccgggcgcggtgctgccc
ggcgatttcaagatcaagccgaccaagatgcgcggcgtggaatcgggcggcatgctgtgc
tccggcaaggagctgggtgtgccggaggacgtggacggcctgatgctgctgccggccgac
gccccggtgggccagagcatccgcgattacctgggcctggacgaccagctgttcacgctg
aagatcacccccaaccgcgcggacgggctgtcgatccgcggtatcgcgcgcgaagtggcg
gcgctgaccggcgccgaactgaagccagtggccatcgctccggtggcgccgtccatcgac
gacgtccgtccggtgaagatcgaatcccgccaagcctgcggccgctacctgggccgcgtg
gtcaagggcgtcgacgccgccgcggccacgccggcctggatgcgccagcgcctggaacgt
tccggcctgcgctcgatctccgccatcgtggacatcaccaattacatcctgctggagcag
ggacagccgatgcacgctttcgatctggccaagatcgagggcggcatcaccgtgcgccag
gcgcgcgcgggcgagagcctgctgtgcctgaacgaaaagaccgtcgagctgcaggacaag
catctggtgatcgccgacgacgccaagccgctggccatgggcggcatcatgggcggcgag
cacagcggcgtcaccaccgcaagccgcgacatcttcctggaatccgcgttcttcgcgccg
gaagcgatcgcgggcaaggcgcgcgagctgggtttcggctccgattcttcctaccgctac
gagcgcggagtcgatttcgcgctgcagcgcgaagcgatggagcgcgccacccgcctggtg
ttggacatctgcggcggcgaagccggcccggtggtcgaggaagtggccgagctgccgaag
cgccaatccgtcaagctgcgcgtggcgcgcgtggccaaggtgctgggcgtggcgctgtcc
gccgagcaaatcggcgacatcctgtcccgtctgagcctgtcctacacgctggccgatgaa
gtcttcaccgtgcaggcgccgtccttccgcttcgacatcgagatcgaggaagatctgatc
gaagaagtggcgcgcgtctacggttacaacaatatccccgccgacgcgccgcgttccggc
atgcgcatgctggcgcagccggaagagaagcggccggtggatcagctgcgccacctgctg
gccggccgcgactaccaggaagtggtcagctacgctttcgtcgacgagcgctgggagcgt
gatttcggcggcaacgacaacgcgatccgcctgcagaatccgatcgccagccagatgagc
gtgatgcgctcgacgctgatcggggggctggtggacgtcttggtcggcaacatcaaccgc
aagcagccgcgcgtgcgcctgttcgaagtggcgcgcgtattcctgcgcggcgagcaaggc
ttcgagcagccggaaaaagcggctggcctggcctgggggccgcgtctggctgagcaatgg
ggcgccaagtccgagcgcgtcgacttcttcgatgtgaaggctgatgtcgaggcgctgttg
cacccggtcaaggccgaataccgcaaggctgcccatcccgccttccatcccggccgctgc
gccgaggtgtgggtggatggcaaggcggtgggcgtgatcggcgagctgcatccgcagtgg
gtgcaggcttatgatcttgcgaccgcgccggtgctgttcgagctggatctggccgctgcc
gtcgcgcgcgaccggatcaaggctgccgtggtcagcaagctgcagccggtgcgccgcgac
ttggcgctgctggtggacgagtccgtgactgtggcgcaactgctggccgcgtttgccgcc
aaacgcgcccaaatcgtcaccgatatagcgctgttcgacgtttatcgcggcaaaggcgtc
gcagaaggcaagaagagtctggcctttagcgtgctgatgcaggacaatagccgaaccctg
accgacgaggatgtggagccggccctgcaggctctgctggacgccgcgtcggcgctgggc
gcgcagctgcgcgtttga
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