Chromobacterium phragmitis IIBBL 112-1: DK842_15120
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Entry
DK842_15120 CDS
T05549
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chri03000
]
DK842_15120
Transcription factors [BR:
chri03000
]
Prokaryotic type
Helix-turn-helix
GntR family
DK842_15120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_18
Asp_aminotransf
HTH_41
Motif
Other DBs
NCBI-ProteinID:
AXE31108
LinkDB
All DBs
Position
complement(3181958..3183391)
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AA seq
477 aa
AA seq
DB search
MIPATFQFELLRGHASPLHRQLYLRIREAILAGQLPPGARLPATRVLAAALGISRGTVDQ
AYGQLLAEGFLLSRAAAGTVVHPLLEMRRPAPPPPAATAPKPNPTDSSEPAPPRPFQLGL
PALDAFPRKLWARLAGRRARALSLAGLNYPDPAGYPPLREAIVRHLALFRGIHCTASQVF
ITSGFQSALGLAARVLLRPGDPVWMEDPGYFRASGALRLAGARLAPAPVDQDGLRVDEAI
RREPDARMAYCTPSHHSPLGVTLSLPRRLELLDWAARRQAWIVEDDYDGEFRYDGPPLPA
LSSLDRSGRALYIGSFSKTLFPGLRLGYLVAPPDVAARFAEACNLLSPAPSILDQATTAD
FLDQGHFARHIKRMRALYAQRRAALAAALQAECGARLRLDGQAVGLQLTAWLPDGEDDRA
AAARLSACGLAGQPLSAFSLECGHPPALLLGFANVPAEQAPALARRLREALDAPLPK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgccaccttccagttcgaattgctgcgcggccacgcgtcgccgctgcatcgc
cagctctatctgcgcatccgcgaggccatcctggccggccaactgccgccgggtgcccgc
ctgccggccacgcgggtgctggccgccgccctaggcatctcgcgcggcaccgtcgaccag
gcctacggccaattgctggcggaaggttttctgctcagccgcgccgccgccggcaccgtg
gtccatcccttgctggagatgcgccgccccgccccgccgccgcccgcggcaacggctccg
aagccaaacccgacggattcgagcgagcccgcgccgccgaggcccttccagcttggcctg
cccgcgctggacgccttcccccgcaagctgtgggcgcggctggccggccgccgcgcccgg
gccttgtctctggcggggctgaactacccggacccggccggctatccgccgctgcgcgag
gccatcgtccgccatctggccttgttccgcggcatccattgcaccgccagccaggtgttc
atcaccagcggcttccagagcgcgctgggccttgcagcccgcgtgctgctgcggcccggc
gacccggtctggatggaagaccccggctacttccgcgccagcggcgcgctgcggctggcc
ggcgccaggcttgcgcctgcgcctgtggatcaggatggattgcgcgtggatgaggccatc
cgacgcgaacccgacgcgcgaatggcctactgcacgccctcccaccattcgccgctgggg
gtcacgctatcgctgccgcgccggctggaactgctggactgggccgcgcggcggcaggcc
tggatcgtcgaagacgactacgacggcgaattccgctacgacggcccgccgcttcccgcg
ctcagcagcctggaccgctccggccgggcgctctacatcggcagcttcagcaaaaccctg
tttcccgggctgcgcctgggctatctggtggcgccgcccgacgtggcggcgcgtttcgcc
gaagcctgcaatttgctctcccccgcgccgtccatcctggatcaggcgacaaccgccgac
ttcctggatcagggccacttcgctcgccacatcaagcggatgcgcgcgctctacgcccag
cgccgcgccgcgctggccgccgccttgcaagccgaatgcggcgcgcggctgcggctggac
ggccaggcggtcggcctgcaactgaccgcctggctgcccgacggcgaagacgaccgcgcg
gcggcggcgcgcctgagcgcctgcggattggcgggccagccgctgtccgccttcagcctg
gagtgcggccatcctccggcgctgctgctgggcttcgccaatgtgccggccgagcaggcg
cccgcgctggcgcggcggctgcgggaggcgctggacgccccgctgccgaaataa
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