Chromobacterium phragmitis IIBBL 112-1: DK842_20070
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Entry
DK842_20070 CDS
T05549
Name
(GenBank) pathogenicity island 1 effector protein SipB
KO
K13285
invasin B
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
DK842_20070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chri02000
]
DK842_20070
Transporters [BR:
chri02000
]
Other transporters
Pores ion channels [TC:
1
]
DK842_20070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
T3SSipB
Goodbye
DUF2207_C
TrbL
Cnd1_N
Vma12
DUF3040
Motif
Other DBs
NCBI-ProteinID:
AXE31988
LinkDB
All DBs
Position
complement(4235817..4237559)
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AA seq
580 aa
AA seq
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MSGSTVIGHSPYLSNPELAKAMFEGTRVGEKFVDTAQKTAQALFNTRVADDAGSPRAKRG
ADLNTPALTPPKKEVDSGSKLTELLGRLMTLLGEVSLSQLESRLATWSALMASQQKQGDE
LSQAFSSAVDEAKLAGDILQAAVGDFDSATKAANDAQRAAAEAKAKLDAMKPGEPGYEAA
KLASDQAALAAQQALGKAKLAGEAAEKARAASVEKNKAADELATKVQGASVNTETAREAG
KAHLSNIATLTYLMAQFSKLVGENSEKSLQNDLELFQAMQESRQKEMDKKSSEYQEEVRK
SEELNRVMGCVGKILGALLTVVSVVAAAFTGGASLALAAVGVALMVADQVGKAITGVSFM
EEAMKPLMEKVIQPLMELISKGLTKALEAFGMDKAKAEKVGAIMGAIVSAIAMIVVVVVV
AVVGKGAAAKLGNALARVIGDAIKKLMPKVLQQLADGVGKSIGKTFVQGMQRLGLRTDEL
SRQMTANTLNKVALGIGAVNTGAQVGGNVSQGVFMKNASDAIAEFTLARAFSEQIEQWLK
QAVEAFGSTQKITQQLTSAMSDAMQQNAEASRFVLRHSQA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtagcacggttatcggtcatagcccctatctcagcaaccccgagctggccaag
gccatgttcgaaggcacgcgggtcggcgagaagtttgtcgacaccgcgcagaagacggcg
caggcgttgttcaacacccgcgtcgccgacgacgccggctcgccccgcgccaagcgcggc
gccgatctcaacaccccggcgctgacgccgcccaagaaggaagtggacagcggctccaag
ctgactgagctgctgggccggctgatgacgctgctgggcgaggtctcgctgtcgcagctg
gaaagccggctggctacctggagcgcgctgatggcgtcgcaacagaagcagggcgacgaa
ctgtcgcaagccttttccagcgcggtggacgaagccaagctggccggcgacatcctgcaa
gccgcggtcggcgatttcgacagcgccaccaaggcggccaacgacgcgcagcgcgcggcg
gcggaagccaaggccaagctggacgcgatgaagccgggcgagcccggctacgaagcggcc
aaactggccagcgaccaggccgcgctggcggcgcagcaggcgctgggcaaggccaagctg
gctggcgaggcggcggaaaaggcgcgcgcggcgtcggtggaaaaaaacaaggcggcggac
gagctggcgaccaaggtccagggcgccagcgtcaacactgaaaccgcccgcgaggccggc
aaggcgcatttgagcaatatcgccacgctgacctacctgatggcgcaattctccaagctg
gtgggagaaaacagcgagaaatcgctgcagaacgacctggagctgttccaggcgatgcag
gaaagccgtcagaaggaaatggacaaaaagtcctccgagtaccaggaagaggtgcgcaag
tcggaggagctcaaccgcgtgatgggttgcgtgggcaagattcttggcgcgttgctgacc
gtggtcagcgtcgttgccgcggccttcaccggcggcgccagcttggcgctggccgcggtg
ggcgtcgcgctgatggtggctgaccaggtcggcaaagccatcaccggggtctccttcatg
gaagaggcgatgaagccgctgatggagaaggtgatccagcccttgatggagctgatttcc
aaggggttgaccaaggcgctggaagccttcggcatggacaaggcgaaagcggagaaggtc
ggggccatcatgggcgccatcgtttccgccatcgccatgatcgtggtcgtggtggtggtg
gccgtggtgggcaagggggcggcggccaagctgggcaacgcgctggctcgggtgataggc
gacgcgatcaagaagctgatgcccaaagtgctgcaacagctggccgacggcgtgggcaag
agcatcggcaagacctttgtccagggcatgcagcgcttgggcctgcgcaccgacgagctg
tcgcggcagatgacggccaataccttgaacaaggtggcgctcggcatcggcgcggtcaac
accggcgcacaagtgggcggcaacgtgagccagggcgtgttcatgaagaacgccagcgac
gcgatcgccgagttcacgctggcgcgcgcgttttccgaacagatcgagcaatggctgaag
caggcagtcgaagccttcggcagcacccagaaaatcacccagcagctgacgtcggcgatg
tccgacgcgatgcagcagaacgccgaggccagccgtttcgtgctgcgccatagccaagcc
tga
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