Chromobacterium phragmitis IIBBL 112-1: DK842_21890
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Entry
DK842_21890 CDS
T05549
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri00906
Carotenoid biosynthesis
chri01100
Metabolic pathways
chri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
DK842_21890 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
chri01006
]
DK842_21890 (hpnD)
Enzymes [BR:
chri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
DK842_21890 (hpnD)
Prenyltransferases [BR:
chri01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DK842_21890 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF4684
DEPDC5_CTD
Motif
Other DBs
NCBI-ProteinID:
AXE32332
UniProt:
A0A344UEH4
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Position
complement(4623188..4624033)
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AA seq
281 aa
AA seq
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MTPDQYCEDKAAASGSSFYHSFRFLPEERRRAITALYAFCREVDDAVDECHDLGVAQAKL
AWWRGQVQRAYRGEADHPVMQALLPHLPAFQLPQSELEEIVDGMEMDLGMVRYQRFQDLL
LYCHRAAGVVGKLAARIFGYTDERTLEYAHELGIAFQLTNIIRDVGEDARRDRIYLPMDE
LQRFNCPAMDILHYEESDAFKGLMAFQIERAHEHYRKAWELLPAADRKSQRPGLLMAAIY
RATLREIQQDGPAKVLNQRLSLGTGRKLWLAWKTWTFGYKP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcccgatcagtattgcgaggacaaggccgcggccagcggctccagcttctatcac
agtttccgttttctgccggaagagcggcggcgcgcgatcaccgcgctatacgcgttttgc
cgcgaggtggacgacgctgtggatgaatgccatgacctgggagtggcccaggccaagctg
gcctggtggcgcggccaagtgcagcgcgcctatcgcggggaggccgatcacccggtgatg
caggcgctgttgccgcatttgccggcgtttcagctgccgcaatcggagctggaggagatc
gtcgatggcatggagatggatctgggcatggtccgctaccagcgcttccaggatttgctg
ctgtattgccaccgggcggccggcgtggtgggcaaactggcggcgcgcatcttcggctac
accgacgagcgcacgctggagtacgcgcacgagttgggcatcgccttccagctgaccaac
atcatccgcgatgtgggcgaagacgcccgccgcgatcgcatttacctgccgatggacgag
ctgcagcgtttcaactgcccggcgatggacattctccattacgaggaaagcgacgccttc
aaggggttgatggcgttccagatcgagcgcgcgcacgagcattaccgcaaagcctgggag
ctgctgccggcggcggaccgcaaatcgcagcgtccggggctcctgatggcggccatctac
cgcgccacgctgcgggaaatccagcaggatggtccggccaaggtgctgaaccagcgcctg
tcgctgggaaccggccgcaagctgtggctggcctggaaaacctggactttcggctacaag
ccgtga
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