Chromobacterium phragmitis IIBBL 112-1: DK842_22270
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Entry
DK842_22270 CDS
T05549
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chri03032
]
DK842_22270
03036 Chromosome and associated proteins [BR:
chri03036
]
DK842_22270
03400 DNA repair and recombination proteins [BR:
chri03400
]
DK842_22270
DNA replication proteins [BR:
chri03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DK842_22270
Chromosome and associated proteins [BR:
chri03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DK842_22270
DNA repair and recombination proteins [BR:
chri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DK842_22270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AXE32396
UniProt:
A0A344UEP0
LinkDB
All DBs
Position
complement(4693742..4694056)
Genome browser
AA seq
104 aa
AA seq
DB search
MTKSELIARLSERLAERNSQLVYKDAELAVKTILDAMANNLAQGSRIEIRGFGSFDLNYR
PPRVGRNPKSGASVSVPEKYVPHFKAGKELRERVDLSLMEQTQA
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgagctgatcgcgaggctgtccgagagactggccgagcgcaattctcag
ttggtctacaaagatgctgagttggccgtcaagaccattttggacgcgatggccaacaac
ctggctcaaggaagccggatcgagattcgcggtttcggtagcttcgatctgaactaccgt
ccgccgcgcgtcggccgcaacccgaagtcgggcgccagcgtctcggttcctgagaaatac
gtgcctcatttcaaggccggcaaggaactgcgcgagcgcgtggacttgtcccttatggaa
cagacccaggcctga
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integrated database retrieval system
