Chryseobacterium sp. JV274: CHRYMOREF3P_0811
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Entry
CHRYMOREF3P_0811 CDS
T08877
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chrj
Chryseobacterium sp. JV274
Pathway
chrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHRYMOREF3P_0811 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrj03019
]
CHRYMOREF3P_0811 (recQ)
03400 DNA repair and recombination proteins [BR:
chrj03400
]
CHRYMOREF3P_0811 (recQ)
Enzymes [BR:
chrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHRYMOREF3P_0811 (recQ)
Messenger RNA biogenesis [BR:
chrj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CHRYMOREF3P_0811 (recQ)
DNA repair and recombination proteins [BR:
chrj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHRYMOREF3P_0811 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
CAD0218948
UniProt:
A0A7U7CUC8
LinkDB
All DBs
Position
I:complement(830400..832604)
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AA seq
734 aa
AA seq
DB search
MSAKKANLSGELKKYFGFSTFKGQQEQIIDNLLNGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSEDGVAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKDDYLDFLKDVKISFFAIDEAHCISEWGHDFRPEYRNLKQIIDRIANVPVIALTA
TATPKVQDDIQKTLGMTNALVFKESFNRPNLYYEVCPKINIDKEIVRFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGENFDPVKGDGANMCDNSSNPPKVKDATADLKKT
LELINDTGEKFKSKDLISVIVGKENAVTKSYKLEQSSYFGFGKEEKDNYWKTILRQATVQ
NCLQKDIETYGVLKITEKGKTVLNGTSKDVFLIAEDREFDLTQAKAESDQVQQQASGGMD
QNLFNLLKELRKKVAKKHGIPPYTVFMDPSLEDMTVQYPITVDEITKIYGVGEGKAKKYG
KEFADYIKTYVEDNNIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIARAKNLSMDE
LLKEMERIVYQGTKLNIDYYIEDNFDEDIVDGFMEFMNESESDSMKVLLDEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccaatttatcaggcgaattgaaaaagtattttgggttttctaca
tttaagggacagcaggaacaaattatagacaacctattgaatgggaaagatatatttgtt
ttaatgcctacgggtggtggaaaatcattatgttatcagcttccggcacttatttcggaa
ggtacggcaatcgtcgtttcgcccttgatagcgttaatgaagaatcaggtagatgcagtg
aacggcctttcatctgaggatggggtagcgcatgtattaaattcctcattaaacaaaacg
cagaccaagcaggtttttgacgatataaaaagcggcaaaaccaaacttctgtatgtagct
cctgaatcattaataaaagatgattacctggattttttgaaagatgtgaaaatttctttc
tttgctatcgacgaagcccactgtatttcagagtggggacatgatttcagaccagaatac
cggaatctgaaacagattatagacagaatcgccaatgtaccggtgattgctttaacggct
actgctactcctaaggttcaggatgatatccagaagactttaggaatgactaatgcattg
gtgttcaaagaaagtttcaaccgtcctaatctatattatgaggtatgtcctaaaatcaat
atagacaaggaaatcgttaggtttatcaatcagcataaagggaaatcaggaattgtatac
tgcctgagccgaagaaaagttgaagaatttgcccagcttctgcaggtaaacggaatcaat
gcacttccttaccacgcaggtcttgaccagaaagtgagagttgccaatcaggataaattc
ctgatggaagaagtagatgtaattgttgctaccattgcctttgggatgggaattgataag
ccggatgtacgttttgtgatccactacgactttccaaaatcattggaaagctactaccag
gaaacaggaagagcaggaagagacggaggtgaaggccactgtctggcattctatgatcct
aaagatattgagaaattagaaaaatttctggcacaaaaacccgtttcagaaagagaaatc
ggattacaacttttaaatgaagtggtaggttatgctgagacttcaatgagcagaagacaa
tatatcctgtattattttggagaaaatttcgatcctgtaaaaggagacggagccaatatg
tgtgacaactcatccaatcctccaaaagtaaaggatgccactgcagacttgaaaaaaacg
ttggaactcattaatgatacaggagaaaaattcaagtctaaagatttgatttccgttatc
gtggggaaagaaaatgcagtgacaaaatcttacaaacttgagcaaagttcttattttggc
tttggaaaagaagaaaaagataattactggaaaacaatcctgagacaggcaaccgttcag
aattgtttgcaaaaggatattgaaacctacggtgttttaaaaattacagaaaaaggaaaa
acggtcctgaatggtacttctaaagacgtatttttaatcgctgaagacagagaatttgac
cttacccaggcaaaagctgagagcgatcaggtacagcagcaggctagcggaggtatggat
cagaacctttttaatctgttgaaagaacttagaaagaaagttgccaaaaaacatggaatt
ccaccatatactgtatttatggatccaagtttggaggatatgaccgttcagtatccgatt
acagtagatgaaattaccaaaatctatggagtaggcgaaggaaaagctaaaaagtatggt
aaagaattcgctgattacatcaaaacatatgtagaagacaacaatatagaacgtactcag
gatatggttttgaaacaggtggccaataaatcgagccataaagttttcattatccagagt
actgataaaaagattgaccttgaagatattgcaagagccaaaaacctttctatggatgaa
ctcctgaaagaaatggaaagaattgtatatcagggaacaaagctgaatatcgactattat
attgaagataattttgatgaagatatcgtagacggcttcatggagttcatgaacgaatct
gaaagtgacagcatgaaggtattactggatgaatttggggatgaactgtccgatgaagaa
gtgagaatgctgaggattaaatttatcagcgatgtagctaactaa
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