Chryseobacterium sp. JV274: CHRYMOREF3P_1172
Help
Entry
CHRYMOREF3P_1172 CDS
T08877
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
chrj
Chryseobacterium sp. JV274
Pathway
chrj00040
Pentose and glucuronate interconversions
chrj01100
Metabolic pathways
chrj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chrj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CHRYMOREF3P_1172
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHRYMOREF3P_1172
Enzymes [BR:
chrj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CHRYMOREF3P_1172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CAD0219701
UniProt:
A0A7U7HCN7
LinkDB
All DBs
Position
I:1203603..1204715
Genome browser
AA seq
370 aa
AA seq
DB search
MKTTFKAALLTVALSFALTGCGQEDIKTDLTENPNQLTLANKLVANAVVPLANCVAPGWA
SQNGGTTGGGTAAETTVTTYAQLKAAIENTAVKVIKVTGTITITTRLSLQDQTGKTLYGA
SGAKLVSTDQTASGSGIINIKRCNNIVIRNLIFEGPGAYDTDGWDNAILDDCRNVWIDHC
EFRDGVDGNFDIKNKSDFVTVSYTKFHYLKAPKPGGSGGTDDHRFSNLIGSSDGATADAG
KLNVTFVRCWWAPGCRERMPRVRFGKIHIVNSYFNSSVSNKCIAAGVQANIRVDGNVFEN
VKEPINLMSGYTAVTVTSNNTFTNVTGNTAGSGTAFTPPYTIPMLSLSSVKSDVTTNAGA
TLGGNICNTL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacatttaaagctgcccttcttacggtagctctaagctttgccttgactggc
tgcgggcaggaagacatcaaaacagatttaacggaaaatccaaaccaacttactcttgca
aacaaactcgttgccaatgccgtagttcctttagcaaactgtgtagccccgggatgggct
tctcaaaatggtggaacaaccggtggtggaacagctgctgaaactactgtgactacctat
gctcagttaaaagctgcgatcgaaaacacagcggtaaaagtcattaaagtgacaggaacc
atcaccattacgactcgtctttcacttcaggatcaaacgggaaaaacactttacggggca
agcggtgcaaaattggtttctacagaccagacggcaagtggttcaggaattatcaatatt
aaaagatgcaacaatatcgttatcagaaatctgattttcgaaggtccgggagcttatgat
acagacggctgggacaatgctattttggatgactgcagaaatgtatggatcgaccattgc
gaattcagagacggtgtagacgggaattttgatattaaaaacaaatctgacttcgttacg
gtttcttatacgaaattccattacctgaaagctccgaaacctggtggttcaggaggaaca
gatgaccacagattctccaatcttatcggatcgagtgacggtgcaacagccgatgcggga
aaactgaatgtaacatttgttcgctgctggtgggctccgggatgcagagagcgtatgccg
agagtgagatttggtaaaatacatattgttaacagctatttcaacagttctgtaagcaac
aaatgtattgcagcaggagtccaggcgaatatccgtgtcgatggaaacgtatttgagaat
gtaaaagagcccattaacctgatgagcggttacacagcggttaccgttacttccaacaat
acatttaccaacgttaccggaaacacagcaggaagcggtacggcatttactccgccttat
acgatcccaatgctttctttatcttctgtaaagtctgatgtaacgaccaatgcaggcgca
actttaggaggcaatatttgcaatacgttataa
DBGET
integrated database retrieval system
