Chryseobacterium sp. JV274: CHRYMOREF3P_1450
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Entry
CHRYMOREF3P_1450 CDS
T08877
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrj
Chryseobacterium sp. JV274
Brite
KEGG Orthology (KO) [BR:
chrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrj03032
]
CHRYMOREF3P_1450
03400 DNA repair and recombination proteins [BR:
chrj03400
]
CHRYMOREF3P_1450
Enzymes [BR:
chrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHRYMOREF3P_1450
DNA replication proteins [BR:
chrj03032
]
Prokaryotic type
DNA Topoisomerases
CHRYMOREF3P_1450
DNA repair and recombination proteins [BR:
chrj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHRYMOREF3P_1450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CAD0220225
UniProt:
A0A7U7CVZ3
LinkDB
All DBs
Position
I:1531014..1532120
Genome browser
AA seq
368 aa
AA seq
DB search
MEKNTDLEMISHLKPSKIVKIMKDPEASAKAVHLVYTTDAETAGITRKKTGKKYSYYKDG
EKIKDKEEITRINSLVLPPAWENVWICALDNGHLQATGFDIKKRKQYRYHPLWSALRNHT
KFYRMLQFGYALPEMRLHIEQDLALRNFEKRKILALIVSLMQRTNIRIGNTIYEKLYGSF
GLTTLKDKHVKVKGQKITFSFKGKKGIMHNVDLRSKRLARLIQKCKDIPGKELFQYFDDE
GNRHSVDSGMVNEYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAENDTQYKKKVKEA
LEIVAENLGNTSAVCRKYYVHPLVINLYENNTIKKYLDELEIIEENDGKADLTKEERLVL
KILENERM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatacagatctggagatgatttctcaccttaagccttcaaaaattgttaaa
ataatgaaggacccggaagcttctgcaaaggcggtacatcttgtatataccaccgatgca
gagaccgccggaattacccgtaagaaaacaggaaagaaatattcctattataaagacggt
gaaaagatcaaggataaggaagaaattacaagaatcaacagcctggtacttccgcctgcc
tgggaaaatgtatggatctgcgcccttgacaacgggcatcttcaggcaacgggctttgac
atcaaaaaaagaaaacaataccgctaccaccctctttggagcgctttaagaaatcatacg
aaattttacagaatgcttcagttcggatatgcgttaccggaaatgcggctgcatatagaa
caggatcttgctttgagaaattttgaaaagcgaaaaattctggctttaattgtgagcctt
atgcaaagaaccaatatccgtattggtaatactatttatgaaaaactgtacggttctttt
ggactgactactttaaaggataagcatgtcaaggtaaaaggacagaaaattacgttctct
tttaaaggcaaaaaaggcattatgcataacgttgaccttagaagtaagaggctggcaaga
cttattcagaaatgtaaagatattccgggaaaggaactttttcaatattttgatgatgaa
ggaaaccgccattctgtggattcaggtatggtgaatgaatatataaaagagatcagcggc
gaagattttacggctaaggatttcaggacctggtctggaacggtaagtgctctgatcgct
tttaaagagatcgggtatgcagaaaatgatactcaatataaaaagaaagtaaaagaagct
ctggagatcgttgcagaaaacttaggaaatacctcagctgtctgcagaaaatattatgtt
catcctttagttattaatctttacgaaaacaataccatcaaaaaataccttgacgaactg
gaaattatagaagaaaatgatggaaaagctgatctgacaaaagaggaaaggctggttctg
aaaattcttgaaaatgagaggatgtga
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