Chryseobacterium sp. JV274: CHRYMOREF3P_2718
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Entry
CHRYMOREF3P_2718 CDS
T08877
Name
(GenBank) DNA polymerase-3 subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chrj
Chryseobacterium sp. JV274
Pathway
chrj03030
DNA replication
chrj03430
Mismatch repair
chrj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHRYMOREF3P_2718
03430 Mismatch repair
CHRYMOREF3P_2718
03440 Homologous recombination
CHRYMOREF3P_2718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrj03032
]
CHRYMOREF3P_2718
03400 DNA repair and recombination proteins [BR:
chrj03400
]
CHRYMOREF3P_2718
Enzymes [BR:
chrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHRYMOREF3P_2718
DNA replication proteins [BR:
chrj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHRYMOREF3P_2718
DNA repair and recombination proteins [BR:
chrj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHRYMOREF3P_2718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
TraI_2_C
Motif
Other DBs
NCBI-ProteinID:
CAD0222240
UniProt:
A0A7U7CY96
LinkDB
All DBs
Position
I:complement(2843151..2844374)
Genome browser
AA seq
407 aa
AA seq
DB search
MYSIIDIESNGAGYRNECIIDIAIYRYDGQKITDQFISLVNPEGDITPFVQKLTSITPKM
VKTAPKFHEIAKRVIEITQNTTLVGHNIDFDYRMLRQSFKRLGYDFKTNTLDTIPLAKKL
IPDEVSYSLGKLVKSLGIPLTNHHRAEGDARATLELFKLLISKDTENEIIQKQHDESNAK
TYINKIKELTQDLPNDKGFVYFQDEAGRIMFSDYVQDINKFSKKVFNSKSKKWEQIQKDV
EQINFELTGTDIIAKLILNSKNIKKKEVLPFGLYFRNNKYIVEKNTLNKTEKPVLKFRSF
TQGTKAVQFIGSQEDFKDFSVLKQKIEFRKRNELWLGPGRKLGEKLFLIIENGKVVSFGF
YELFTQIQTLSKLAKLKIDLPLSSTDLNNELQLALLRSDFETLPLPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaattatagatatagaaagtaatggtgcaggttatagaaatgaatgcattatc
gatatcgccatctacagatatgatggtcagaaaattactgaccagtttatttctctggta
aaccctgaaggagatattaccccttttgtacagaaactgaccagtattaccccaaaaatg
gtcaaaactgctccgaaatttcatgaaattgccaagagggttatcgaaataactcaaaat
acaaccctggtaggtcataatattgattttgattacagaatgcttcgtcagtcattcaaa
aggcttggatatgacttcaaaaccaatactttagatacaattccgttggctaagaaactg
attcctgatgaggtaagttattcactgggaaaactggtgaaatctctgggaattcctttg
accaatcatcacagggctgaaggtgatgcaagagctacattagaacttttcaaacttctg
atttcaaaagatactgaaaatgagatcattcagaaacaacatgatgagtctaatgcaaaa
acctatatcaacaagatcaaagagcttactcaggatcttcccaacgataaaggctttgtc
tattttcaggatgaagcgggacggattatgttctcagattatgttcaggatatcaacaag
ttttcaaaaaaagttttcaattcgaaatcaaaaaaatgggaacagattcagaaagatgtt
gagcagattaattttgagcttaccggaacagacattattgctaagctgatcctgaactcc
aaaaatattaaaaagaaagaagtactgcctttcggattgtatttcaggaacaataaatat
atagttgagaaaaatacactcaataaaaccgaaaaaccggttttaaaattcagatcattt
acgcaaggaacaaaagcggttcagtttattggttctcaggaagattttaaagatttttca
gtattgaaacagaaaattgaattcagaaaaagaaatgaactttggctgggaccaggaaga
aaactgggggaaaaattatttttaattatagaaaacgggaaagtggtttcatttggtttc
tatgaactgtttacccaaattcagactttaagtaagctggctaaattaaaaattgacctg
ccgttatcttccacagatctgaataatgaactgcagctggcactccttcgcagcgatttt
gaaacactgcctttaccgaaatga
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