Chryseobacterium sp. JV274: CHRYMOREF3P_3604
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Entry
CHRYMOREF3P_3604 CDS
T08877
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
chrj
Chryseobacterium sp. JV274
Pathway
chrj00470
D-Amino acid metabolism
chrj00550
Peptidoglycan biosynthesis
chrj01100
Metabolic pathways
chrj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
chrj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CHRYMOREF3P_3604 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHRYMOREF3P_3604 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CHRYMOREF3P_3604 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chrj01011
]
CHRYMOREF3P_3604 (ddl)
Enzymes [BR:
chrj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CHRYMOREF3P_3604 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
chrj01011
]
Precursor biosynthesis
Amino acid ligase
CHRYMOREF3P_3604 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CAD0223530
LinkDB
All DBs
Position
I:complement(3796220..3797209)
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AA seq
329 aa
AA seq
DB search
MVMNKKSVAVVMGGYSDEYVVSLKSGQLIYDSLDRNLYDVYKVVVLKDEWYFLGENDKKY
EINRGDFSVTLDNGETLKFDACFNIIHGTPGENGILQAYWDAIGQKYTGCDFYQSALTFN
KKDTLAVLSKYGVPSAKSIYLRKGEEINVDKIVSELNLPLFVKPNQSGSSLGITKVKEKS
ELIAATEIAFKEDNEILIESFLDGMEVSVGVIDFKGETIVLGITEIVPTNEFFDYEAKYE
GASEEITPARIDDETTKRVEEIAKRAYNSLGMSGFSRSEYILMNGIPYMLEMNTNPGFSP
ASILPQQAKHYGISIMDLCGNEVEKALNK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaacaaaaaaagtgttgccgtagtaatgggaggctattctgatgaatatgtc
gtttctttaaaaagcggacaattgatttatgattctttagacagaaatctctatgatgta
tataaggtagtagtccttaaagatgaatggtattttttaggagaaaatgataaaaaatac
gagatcaacagaggtgatttttctgtaactttagataatggggaaaccttaaaatttgat
gcctgcttcaatatcatccacgggactccgggagaaaacggaattcttcaggcatactgg
gatgcaataggtcaaaaatataccggatgtgatttttaccagagtgctcttacattcaat
aagaaagatactcttgccgtattatcaaagtatggagttccttccgcgaaaagcatctat
ttaagaaaaggtgaagaaatcaatgtagataagattgtatcagaattgaatcttccgcta
tttgtaaaacctaaccagtccggatcttctctgggaatcactaaagtaaaagaaaaatct
gaactgattgccgctactgaaatcgcattcaaagaagataatgaaatcctgattgaaagt
ttcttggatggaatggaagtttctgtaggagttattgattttaaaggagaaaccattgtt
ctgggaattacagaaattgttcctaccaacgagtttttcgattatgaagcaaaatatgaa
ggtgcttctgaagaaattacaccagcaagaattgatgatgaaaccacaaaaagagtggaa
gaaatcgctaaaagagcatacaattcattaggaatgagtggtttttcaagaagcgaatat
attttaatgaatggaattccttatatgcttgaaatgaataccaatccgggattctctcct
gcaagtattctcccacaacaggcaaaacactatggaatttccattatggatctttgcgga
aatgaagttgaaaaagctttaaataaataa
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