Chryseobacterium sp. KCF3-3: KCF3NO3_13230
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Entry
KCF3NO3_13230 CDS
T11022
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chrk Chryseobacterium sp. KCF3-3
Pathway
chrk03030
DNA replication
chrk03430
Mismatch repair
chrk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KCF3NO3_13230
03430 Mismatch repair
KCF3NO3_13230
03440 Homologous recombination
KCF3NO3_13230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrk03032
]
KCF3NO3_13230
03400 DNA repair and recombination proteins [BR:
chrk03400
]
KCF3NO3_13230
Enzymes [BR:
chrk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KCF3NO3_13230
DNA replication proteins [BR:
chrk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KCF3NO3_13230
DNA repair and recombination proteins [BR:
chrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KCF3NO3_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
TraI_2_C
Motif
Other DBs
NCBI-ProteinID:
BFO65340
LinkDB
All DBs
Position
complement(1513020..1514243)
Genome browser
AA seq
407 aa
AA seq
DB search
MYSIIDIESNGAGYRNECIIDIAIYRYDGQKIIDQFISLVNPEGDITPFVQKLTSITPKM
VKTAPKFHEIAKRVIEITQNTTLVGHNIDFDYRMLRQSFKRLGYDFKINTLDTIPLAKKL
IPDEVSYSLGKLVKSLGIPLTNHHRAEGDARATLELFKLLISKDTENEIIQKQHDESNAK
TYINKIKELTQDLPNDKGFVYFQDEAGRIMFSDYVQDINKFSKKVFNSKSKKWEQIQKDV
EQINFELTGTDIIAKLILNSKNIKKKEVLPFGLYFRNNKYVVEKNKLNKTEKPVLKFRSF
TQGTKAVQFIGSQEEFKDFSVLKQKIEFRKRNELWLGSGRKLGEKLFLIIENGKVVSFGF
YELFTQIQTLSKLAKLKIDLPLSSTDLNNELQLALLRGDFETLPLPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaattatagatatagaaagtaatggtgcaggttatagaaatgaatgcattata
gatatcgccatttacagatatgacggtcagaaaattatagaccagtttatatctctggta
aaccctgaaggtgatattaccccttttgtacaaaaactgaccagtattaccccgaaaatg
gtcaaaactgctccaaaatttcatgaaattgccaaaagagtgatagaaattactcaaaat
acaactttggtaggtcataatattgattttgattacaggatgcttcgccagtcattcaaa
aggcttggttatgattttaaaatcaacactttagatacaattccgttagcgaaaaaactg
attcctgatgaggtaagttattcgttgggaaaactggtgaaatcattgggtattcctttg
acgaatcatcacagggcggaaggcgatgcaagagctaccttagaacttttcaaacttctg
atttcaaaggatacagaaaatgaaatcattcagaagcagcacgatgagtctaatgccaaa
acgtatatcaataagatcaaagaactgacccaggatcttcctaatgataaaggatttgta
tactttcaggatgaagctggtcgtatcatgttctctgattatgttcaggatatcaacaaa
ttttccaaaaaggttttcaattccaaatcaaaaaaatgggaacagattcagaaagatgtt
gagcagattaattttgagcttaccggaacagatattattgccaaattgatcctgaattcc
aagaatattaaaaagaaagaagttttacctttcggattatatttcaggaataataaatat
gtggttgagaaaaataaactcaataaaactgagaaaccggtcttgaaattcagatcattt
actcaggggacaaaagctgttcagttcattggttctcaggaagaatttaaagatttttct
gtcctgaaacagaaaattgaattcagaaaaaggaatgaactttggttggggtctggaaga
aaattaggagaaaagttatttttaatcatagaaaacgggaaggtggtttcctttggattc
tatgagctgtttacgcagattcagacactgagtaagctggctaagttgaaaattgatctt
ccgctatcttccacagatctgaataacgaattgcagctggcactgcttcgtggggatttt
gagacattaccgttaccgaagtaa
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