Chryseobacterium sp. KCF3-3: KCF3NO3_24540
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Entry
KCF3NO3_24540 CDS
T11022
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
chrk Chryseobacterium sp. KCF3-3
Pathway
chrk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KCF3NO3_24540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrk03400
]
KCF3NO3_24540
DNA repair and recombination proteins [BR:
chrk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KCF3NO3_24540
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KCF3NO3_24540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BFO66471
LinkDB
All DBs
Position
complement(2822840..2823526)
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AA seq
228 aa
AA seq
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MNSQNGFLLSFIKYGENDAVLHCFTEEEGFQSYFLKGIYSKKNKKKALLQPLSQLNFSVN
PPRGNGIPSVSKFELVKNNDIYTDIKVNTVIFFISDFLSHILKHENKNIPIYSGIDHLIS
ELTHKNYQAHLLFLLAFLKIQGVAPLLSEGPFLDPETGTFSLGICHQLFNEEISMLWKEA
LCAEDFYATKIHSSLRKDFLDSLLVYYHYHITDFKTPASLEIIQQIFE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacaaaacggttttttactttcatttatcaaatatggggaaaatgatgctgta
ttgcattgttttacagaagaagaaggttttcagagctattttctgaagggaatttattcc
aaaaagaataaaaagaaagccttgcttcaaccgttgagccagctcaatttttctgtaaat
ccaccacgtggcaacggtattccgtctgtttcaaaatttgaactggtaaaaaacaatgac
atttatacagatatcaaggtcaataccgtcattttctttatttcagattttctgagccat
attcttaagcatgagaataaaaatattccgatttattccggtattgatcatcttatcagt
gagctgacccataaaaattatcaggcacatcttctgtttttgctggcttttttaaaaatt
cagggcgttgctccattgttgagtgaaggcccatttttagatccggaaaccggaactttt
tcacttggaatctgtcaccagcttttcaatgaagaaatttccatgctttggaaagaagca
ctttgtgcagaagatttttatgccacaaaaatccattcctccttgagaaaagatttcctt
gacagccttttggtatactatcattaccatataacggatttcaaaactccagcctccttg
gaaatcatacagcagatatttgaatag
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