KEGG   Chryseobacterium sp. KCF3-3: KCF3NO3_25770
Entry
KCF3NO3_25770     CDS       T11022                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
chrk  Chryseobacterium sp. KCF3-3
Pathway
chrk03420  Nucleotide excision repair
chrk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:chrk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KCF3NO3_25770
   03430 Mismatch repair
    KCF3NO3_25770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chrk03400]
    KCF3NO3_25770
Enzymes [BR:chrk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KCF3NO3_25770
DNA repair and recombination proteins [BR:chrk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KCF3NO3_25770
   MMR (mismatch excision repair)
    Other MMR factors
     KCF3NO3_25770
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Viral_helicase1 UvrD_C_2 AAA_30 PcrA_UvrD_tudor ResIII
Other DBs
NCBI-ProteinID: BFO66594
LinkDB
Position
2961055..2963385
AA seq 776 aa
MDYLKGLNESQYEAVTSLQGPLMVLAGAGSGKTRVLTMRIAHLIHNGIDPFNILALTFTN
KAAREMKDRIAKVVGDSNARSLWMGTFHSVFARILRIEAHYLGYPSNFTIYDQQDALNVI
KKVLKDMNIDADLYKPKKVQARISTYKNNLITVKAYFNNPELMEADEKANMKFIGQIYQK
YVDQCFRNGSMDFDDLLLKTNELLTRFPEVLAKYQDRFRYIMVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYTDAKTVSLEQNYRSTQNIVNAANVV
IAKNLQQFKKNVFSDNEEGDKIKIYRSLSDADEANFVAGNIWELRNRDQRKYSDFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIGYLRLLINENDSEALMRIINYPA
RGIGETTQNKLIVFADAHNIAVSKVLENLPMYAPQLGLNNGVLNKLNDFWSMIKAFQVLL
KTETAYSVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQMQLEDGDPS
LSNFLENIALSADTQDKELEDDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATRE
DLEEERRLFYVALTRAEKQAFFSYAVSRFQWGKITDAEPSRFLSEIDDQYIEFLNPALEK
RFINNSGVKSNIFDEHPSEMKSFKKVEKKTIDRGDTSKPAPEVRKLKPVSTAKIINPSGA
SSQDIEVGDKVRHDRFGIGEVTFLDGTDPQNIKAKVVFMHEGEKNLILKYAKLTKI
NT seq 2331 nt   +upstreamnt  +downstreamnt
atggactatttgaaaggactcaacgaatcacaatatgaagctgttacctctttacaagga
cctctcatggtacttgccggagcaggttcaggaaaaacgcgtgtattgactatgcgtatt
gcccatttaatacacaacggaatagaccctttcaatatcctggcgcttacctttaccaat
aaagcggcacgtgagatgaaagaccgtatcgccaaagtagtaggagacagcaatgcaaga
agtctttggatgggtacatttcactccgtttttgcaagaattctgagaattgaagctcat
tatctgggatatccttccaattttaccatttatgatcagcaggacgccctgaatgtgatt
aaaaaagttctgaaggatatgaatattgatgcagatctttataaacctaagaaagttcag
gcaagaatttcaacctataagaataacctgattacagtaaaagcttatttcaacaatcct
gaactgatggaagcggatgaaaaagcaaatatgaaattcatcggacagatttaccagaaa
tatgtggatcagtgcttcagaaacggatctatggattttgatgacctgttgttgaaaacc
aatgaattattgacacgttttccggaagtactggcaaaatatcaggacagatttcggtac
atcatggtagatgagtaccaggataccaaccactctcagtatcttattgtgaaagctttg
gcttcaaaatttgagaatatctgtgtggtaggagatgatgcacagtctatttattctttc
cgtggagcgaatatttataacatcttaaactttaaaaaagattatacggatgccaaaaca
gtatctctggagcagaattaccgttccacacagaatattgtaaatgcagctaatgtggtc
atcgctaaaaaccttcagcagtttaagaaaaatgtattcagtgataatgaagaaggagat
aagattaaaatataccgatctctttccgatgctgatgaagccaatttcgtggcaggaaat
atctgggaacttcgtaatcgtgaccagagaaagtacagcgattttgctattttatacaga
accaactctcagacacgtgcttttgaagatgcactgagacgtaaaaatattccgtacaaa
gtatatggaggtctttctttctatcagagaaaagaagtaaaagaccttattggatacctt
cgtcttctgatcaatgaaaatgattctgaagcattaatgaggattatcaattatccggca
agaggaatcggagaaacgacgcagaataaactgattgtttttgctgatgcccacaatatt
gcagtttcaaaagtattggaaaaccttccgatgtatgcaccgcaattaggtttgaacaat
ggggttttaaacaaattgaacgacttctggtctatgatcaaagcttttcaggtattgctg
aaaacagaaacggcttacagtgtggctatggaagtagcaaaacgaagcgggttaatcaaa
tttttaaaagatgatcagactcctgaagggatttccagagtagaaaacgtacaggaattg
atgaactctatgcagggattcattgaagagcagatgcagcttgaagatggtgatccgagt
ctttccaatttccttgaaaacattgcactttctgcagatactcaggataaagaactggaa
gatgatatggtttctttgatgaccattcacctttcaaaaggattagaattcccggtggta
cacttagtaggacttgaagaaaaccttttcccaagctttatgagttcggcaaccagagaa
gatcttgaagaggagagaagattattctatgtggcattgacaagagcagaaaagcaagcc
ttcttctcttatgctgtttcccgttttcaatgggggaaaattacggatgctgagccttca
agattcttaagtgaaattgatgatcaatatattgaattccttaatcctgctttggaaaaa
aggtttatcaataattcaggagtgaaatccaatatctttgatgagcatccttcagaaatg
aaatctttcaaaaaggttgaaaagaaaactattgacagaggtgatacttcaaaacctgct
cctgaagtcagaaaactgaaaccagtaagcacggctaaaattatcaacccaagcggagct
tcttctcaggatattgaagtaggagataaagtgagacacgatcgtttcggaataggtgaa
gttactttcttagacggaacagatcctcagaacatcaaagcaaaggttgttttcatgcat
gaaggagagaaaaatctgatcctgaaatatgctaaactgactaagatttaa

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