Chryseobacterium sp. KCF3-3: KCF3NO3_26360
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Entry
KCF3NO3_26360 CDS
T11022
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
chrk Chryseobacterium sp. KCF3-3
Brite
KEGG Orthology (KO) [BR:
chrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrk03032
]
KCF3NO3_26360
03036 Chromosome and associated proteins [BR:
chrk03036
]
KCF3NO3_26360
03400 DNA repair and recombination proteins [BR:
chrk03400
]
KCF3NO3_26360
DNA replication proteins [BR:
chrk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KCF3NO3_26360
Chromosome and associated proteins [BR:
chrk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KCF3NO3_26360
DNA repair and recombination proteins [BR:
chrk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KCF3NO3_26360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF4777
COMMD9_HN
DUF937
Motif
Other DBs
NCBI-ProteinID:
BFO66653
LinkDB
All DBs
Position
complement(3022484..3022774)
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AA seq
96 aa
AA seq
DB search
MTKAELVNTISNKLGTEKNETQKVVEAFMQEIRTSMYNGDNVYLRGFGSFIIKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKSFVEKVKTKVAVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaattggtaaacaccatctcaaataagttgggaacagaaaagaatgaa
acacagaaagttgtagaagcttttatgcaggagatcagaacttctatgtataatggggat
aatgtttatctaagaggttttggatcttttatcattaaaacaagagctgctaaaacagga
agaaatatttctaaaaacactgcaattgagattcctgctcataacattcctgctttcaaa
ccatcaaaatcttttgttgagaaagtaaaaactaaagttgcagtaaaataa
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