KEGG   Chryseobacterium sp. KCF3-3: KCF3NO3_26560
Entry
KCF3NO3_26560     CDS       T11022                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
chrk  Chryseobacterium sp. KCF3-3
Pathway
chrk03030  DNA replication
chrk03410  Base excision repair
chrk03420  Nucleotide excision repair
chrk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chrk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KCF3NO3_26560 (polA)
   03410 Base excision repair
    KCF3NO3_26560 (polA)
   03420 Nucleotide excision repair
    KCF3NO3_26560 (polA)
   03440 Homologous recombination
    KCF3NO3_26560 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chrk03032]
    KCF3NO3_26560 (polA)
   03400 DNA repair and recombination proteins [BR:chrk03400]
    KCF3NO3_26560 (polA)
Enzymes [BR:chrk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KCF3NO3_26560 (polA)
DNA replication proteins [BR:chrk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KCF3NO3_26560 (polA)
DNA repair and recombination proteins [BR:chrk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     KCF3NO3_26560 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KCF3NO3_26560 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 DUF2202 HHH_5 HHH_2 APG12
Other DBs
NCBI-ProteinID: BFO66673
LinkDB
Position
3045606..3048446
AA seq 946 aa
MDATHDKRLFLIDAYAMIFRGYYALIRNPRLTSKGLDTSAIFGFTNSLIELIRREKPTHL
AVVFDVGQASVRTDDYSDYKANRSETPEAIKIAVPYIHKILEAMHIPILGVEGYEADDVI
GTIACKAEKEGYTTFMVTPDKDFAQLVTDKIKIYKPGLKGGDIEILGVEEVKAKYEIEDP
KQVIDFLAMMGDAVDNIPGLEGVGEKTAMKFLKEFGNIETLLANTDKLKGKLKEKVEASA
ERGIMSKKLATIICDAPVEFHQEQYDLETPDFEKVKEVFDEIEFRRLYENLYRAFAPATV
EAVVVNEVEVKEKQASAAGEVKGQVMQLDLFANFEELEQATSTKSTIENNDHLYQYIDNS
KAQKKLVDNLLQQKVVCFDTETTSLNELEAELVGMSFSYKKGLAYYIPLSENREEVLQTL
EIFRPFFEKEDLLKVAHNLKYDYKVLKQYDITVKGAMFDTMIAHYLLNPDGRHGMDYLSE
VYLNYKPVSIETIIGKKGKKQGSFRDADVRTQTDYAAEDADVTFQLYELFAPQLKKENLE
ELFYNIEMPLMEVLAKMELSGISLDEKWLAQESVDLENDLKQLETKIFELSEEEFNMNSP
KQLGEILFEKMQLDPKAKKTKTGQYATSEDVLQKLSSKHEIIKHILEYRTYQKLKSTYVD
ALPSQIEKKDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTVRGQQIRGAFVSGEGKKII
SADYSQIELRLIAEISGEDNMIKAFQDGEDIHASTAAKLFKIPLAEVSKTQRSQAKTVNF
GIIYGQGAFALAEQTGLSRTEAKQMIEAYFETYPKLKEYMAEQVNKARQVGYVETILGRK
RHLKDINSNNFVVRGHAERNAVNAPVQGSAADVVKLAMIKIDRELDEQQLKTKMLLQVHD
ELVFESPVDEIDTASKLIKTEMESALKTQVPLLVEIGVGDNWLEAH
NT seq 2841 nt   +upstreamnt  +downstreamnt
atggacgcaacacacgataaaaggctgtttctcatcgatgcttatgcgatgattttcaga
ggatattacgcactaatcaggaatccgagacttaccagcaaaggactggatacttctgct
atctttgggtttaccaattctttgatcgaattgatcagaagagaaaaacctactcacctg
gcagttgtttttgatgtaggacaggccagtgtaagaactgatgactattcagattacaaa
gccaatagaagtgaaactcctgaagcgatcaaaattgcggttccatacatccacaaaatt
ctggaagcaatgcatattccgattcttggagtagaaggatatgaagccgatgatgttatt
ggaactattgcatgcaaagcagaaaaagaaggatataccactttcatggtgacgccggat
aaggattttgcacagctggttaccgataaaattaaaatttataagccaggtttaaaaggt
ggcgatatcgaaattctcggagttgaagaagtaaaggcaaaatatgagattgaagaccct
aaacaggtgatagatttccttgctatgatgggagatgcagtagataatattcctggatta
gaaggagtaggagagaaaacggctatgaaattcctgaaagaattcggaaatatcgaaacg
ttgcttgccaataccgataagctgaaaggaaagttgaaagaaaaagtagaagcttcagca
gaacgtggtattatgtctaaaaaactggcaaccattatctgtgatgctcctgtagaattc
catcaggaacaatatgaccttgaaactccggattttgaaaaagtaaaagaagtctttgat
gaaatagaattcagaagactatatgaaaatctttacagagcttttgctcctgccactgtg
gaagcagtagttgtaaacgaagtagaagtaaaagaaaagcaggcttctgcagctggagaa
gtaaaaggacaggtgatgcagcttgacctttttgccaactttgaagaactggaacaggct
acttctacaaagtctaccattgagaataatgatcacctttatcagtatatagacaattca
aaggctcagaaaaaactggttgacaacttattacagcaaaaagtagtttgttttgatacg
gaaaccacttcattgaatgagctggaagcagaactggtaggaatgagcttctcttacaag
aaaggattggcctattatattccgctttctgaaaacagagaagaagtattgcagaccctg
gagattttcagaccgtttttcgaaaaagaagacctgctgaaagttgctcacaatcttaaa
tacgattataaggttttaaaacaatacgacatcaccgttaaaggggcaatgttcgatacc
atgattgcccactacctgctgaatccggatggaaggcacgggatggattacctttcagaa
gtgtatctgaactacaaaccggtatctattgaaaccattattggaaagaaagggaaaaaa
caaggcagcttcagagatgcagatgtaagaacacagacagattatgcggcagaagatgca
gatgtaactttccagttgtacgagctttttgctcctcaattgaaaaaggaaaatctggaa
gagcttttctacaatatcgaaatgcctctgatggaagtattggcaaaaatggagctttcg
gggatttccctggatgaaaaatggctggcacaggaaagtgttgaccttgaaaatgatctg
aaacagctggaaacgaagatttttgaactttcagaagaagaattcaatatgaattccccg
aaacagctaggagaaattctgtttgaaaaaatgcagctggatccaaaagctaaaaaaaca
aagacaggacaatatgcaacctcagaagatgttcttcaaaaattgagttcaaaacatgag
atcatcaagcatattctggaatacagaacctatcagaaattaaaatcaacctatgtagac
gctttgccttcacagattgagaaaaaagataacagagtacataccaacttttcacagact
acagccgctacaggccgtttggcgagtgtaaacccgaacctgcagaatattcctatccga
acggtgagaggacaacagattcgtggagcatttgtttccggagaaggaaagaagattatt
tctgccgattattcacagattgaacttcgtttgattgctgaaatttccggagaggataat
atgattaaagctttccaggatggagaagatatccacgcttctacagctgcaaaactcttt
aaaattcctttggctgaggtttcaaaaacccagagaagtcaggctaaaaccgtaaacttc
ggaattatctatggacagggagcttttgctttggcagaacaaaccggattatcccgtaca
gaagctaaacaaatgatcgaagcttatttcgaaacctatccgaaattgaaggaatacatg
gcagaacaggtgaacaaagcacgccaggtaggatatgtggaaaccattttaggaagaaaa
cgtcatttgaaagatattaattccaataattttgtggtaagaggacatgcagaaagaaat
gcggtgaatgcgcctgttcagggaagtgcagcagatgttgtaaagcttgccatgattaaa
atagacagagaacttgatgagcagcaacttaaaacaaaaatgctgcttcaggtacatgac
gaattggtatttgaatctccggtagacgagattgataccgcttcaaaattgatcaaaact
gaaatggaaagcgccttaaaaacacaggttccactattggtagaaattggagtaggagat
aactggctggaagcgcattaa

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