Chryseobacterium sp. KCF3-3: KCF3NO3_30250
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Entry
KCF3NO3_30250 CDS
T11022
Symbol
dacB_1
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
chrk Chryseobacterium sp. KCF3-3
Pathway
chrk00550
Peptidoglycan biosynthesis
chrk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chrk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KCF3NO3_30250 (dacB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chrk01002
]
KCF3NO3_30250 (dacB_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chrk01011
]
KCF3NO3_30250 (dacB_1)
Enzymes [BR:
chrk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KCF3NO3_30250 (dacB_1)
Peptidases and inhibitors [BR:
chrk01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
KCF3NO3_30250 (dacB_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
chrk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
KCF3NO3_30250 (dacB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Phi812_tail_tube
Ependymin_amoebozoa
Motif
Other DBs
NCBI-ProteinID:
BFO67042
LinkDB
All DBs
Position
3507475..3508944
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AA seq
489 aa
AA seq
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MVNFRKYISSAAVLASGLFLAQSTVSTVLYSQNYDNQKSSLNLPSPVSTMVEKTVLSAKE
LVDINVNTMMADPVLKNATWGFVVYDPKTKKVISSYNENTPLVPASTTKLLTTETALNML
GENYRWMTQLEYSGTIDENGVLNGNLYVIGSGDPSLGTNKAGAASYRDIISDFVGGISRE
GIKKVNGDIIIQTALFKGNISVLPENVVWLENNNYYLPAGSTRDINPANEKLIVKKGGFS
TEKKFFYVSPYNHQMVYADKYEGNGALTTKLPDAPAYLANSFRTTLVKSGIPVTGKVTPK
MTDAAPENRKMLSAYKSPTLNDIIYYTNQHSDNSLAEALLRTVGYQKMGDQTSESGRMVV
TNHLKDAGFDMIGLNYIDGSGLSRSNNVTPISQVKFLTSLMDQKYYRSYLTSLPIGGQSG
TLKRMFNMGGNGQVFAKTGTLNKVKTLAGYLKTNSGKTLVFSLMVNNYSGSVDMVKKRME
KILEPALDL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatttcagaaaatatatttcaagtgcggcggtgttggcttctggtcttttcctg
gctcaatctaccgtttctaccgttctttattctcagaattatgacaatcagaaaagcagc
ttaaacctgccgtcacccgttagtacgatggtggagaaaactgttttgtcagcaaaagaa
cttgtagacattaatgtaaacacaatgatggcggatcctgtgctgaaaaatgcaacctgg
ggattcgtagtgtatgatccgaaaacgaagaaggtaatctcttcgtataacgaaaatact
cctttagtacctgcttctactacaaagttgcttacaacggaaacggcattaaacatgctg
ggtgaaaattaccgttggatgactcagctggagtactcaggaacgatagacgaaaatgga
gtgttgaatggaaatctttatgtgataggaagcggtgacccttctttgggaactaacaaa
gctggtgcagcatcttatcgagatattatttcagatttcgtaggcggtatttcaagagag
ggaatcaaaaaggtaaatggtgatattatcattcagacagcgcttttcaaaggcaatatt
tcagtgcttccggaaaatgttgtatggttggaaaacaataattattatctgcctgcagga
agtacccgcgatatcaaccctgccaacgaaaaactgattgttaaaaaaggaggtttctct
acagaaaagaaatttttctacgtttctccttacaaccatcagatggtatatgctgataaa
tacgaaggaaacggagctttaacaaccaaacttcctgatgctccggcttatcttgccaac
tctttcagaacaacattggtaaaaagcggaattcctgttaccggaaaagtaactccgaaa
atgacagatgcagcaccagaaaacagaaaaatgctttcagcgtataagtccccaacttta
aatgatattatttattataccaatcaacacagtgacaattcactggcagaagctttgctg
agaacggtaggatatcagaaaatgggagaccagacttcagaatccggaagaatggtggtg
actaatcacctgaaagatgccggttttgatatgattggtcttaactatatagatggaagc
ggactgtcaagaagcaataatgtaacgccaatttctcaggtgaagtttcttacttctctg
atggatcagaaatactacagatcttatctgacttctttacccatcggaggacaatccgga
actttaaaaagaatgttcaatatgggaggaaacggacaggtttttgctaaaacaggaaca
ctgaataaagtaaaaacattagccggttatctgaaaacaaattccggaaaaacactggtt
ttttctttaatggtgaataactattccgggtcagtagatatggtaaaaaagagaatggag
aaaattcttgaacctgcactggatctttaa
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