Chryseobacterium sp. KCF3-3: KCF3NO3_30740
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Entry
KCF3NO3_30740 CDS
T11022
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
chrk Chryseobacterium sp. KCF3-3
Pathway
chrk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
chrk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KCF3NO3_30740 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
chrk01007
]
KCF3NO3_30740 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chrk03016
]
KCF3NO3_30740 (lysS)
Enzymes [BR:
chrk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
KCF3NO3_30740 (lysS)
Amino acid related enzymes [BR:
chrk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KCF3NO3_30740 (lysS)
Transfer RNA biogenesis [BR:
chrk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KCF3NO3_30740 (lysS)
Prokaryotic type
Other AARSs
KCF3NO3_30740 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Rho_N
Motif
Other DBs
NCBI-ProteinID:
BFO67091
LinkDB
All DBs
Position
3552013..3553710
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AA seq
565 aa
AA seq
DB search
MQLSEQEIIRREKLNKLTEMGINAFPADEYIITDTTESIKQDFSESKQVKIAGRLMSRRI
QGKASFAELQDSKGKIQVYFNRDEICPGEDKELYNEVYKHLLDIGDIIGIEGELFTTQVG
EKTVLVKNFTLLTKALRPLPQAKTDDNGVVHDGFTDPELRYRQRYVDLTVNPQVKEIFVK
RTKLFNAMRTFFNDAGYFEVETPILQSIPGGAAAKPFITHHNALDIPLYLRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTEKLLEFCAIQVN
GTTTATFGEHNVDFKAPYPRVSMTEAILKFTGFDITGKTEKELYDFAKSIGIEVNETMGK
GKLIDEIFGEKCEGNFIQPTFITDYPIEMSPLTKKHRSKEGLTERFELMVCGKEIANAYS
ELNDPIDQRERFEAQMALSERGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTN
NASIQEVLFFPQMRPEKAVPQIELGEDEKVILEILNSQEEAMSLAEVKERSQLSGKKWDK
ASKTLTKNNIVKVEKIDENLLMKLA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatcagaacaagaaatcattagaagagaaaagctgaataagcttactgaaatg
gggattaatgcgttccctgcggatgagtatataattacagatactacagaatctataaaa
caggacttttctgaaagtaaacaggtgaagatcgctggtagattgatgtcccgcagaatt
caaggaaaagcttcttttgcagaattgcaggattctaaaggaaaaatccaggtttacttc
aacagagacgagatctgtccgggtgaagataaagaactatataatgaagtttacaagcac
cttttggatatcggtgatattatcggtattgagggagaattgtttactactcaggtagga
gagaagactgttttagtgaaaaactttacgcttcttacaaaggctttacgtcctcttcct
caggcaaaaactgacgataacggtgttgtacacgatgggttcaccgatccggaattaaga
tacagacagcgttatgtagatttaacggtaaatccacaggtaaaagaaatttttgtgaaa
agaacaaaattgttcaatgccatgagaacattctttaatgatgcaggatattttgaagtg
gaaacaccaattctacagtcaattcctggtggagctgcagcaaaaccatttatcacgcac
cacaatgctttagatattccattatatttaagaattgctaacgaattgtatctgaaaaga
ttgatcgtaggtggttttgatggtgtatatgagttctctaaaaacttcagaaatgaaggg
atggacagaacccataacccggaatttacggctatggaaatctatgtagcgtacaaagat
tacaactggatgatggatttcactgagaaattattggaattctgtgctatccaggtaaac
ggaactacaacggctactttcggagaacataatgtagacttcaaagctccttatccaaga
gtttccatgacagaagcaatccttaaatttacaggattcgatatcactggaaaaacggag
aaggaattatacgattttgccaagtctatcggtattgaagtgaatgagacaatggggaaa
ggaaaattaatcgatgagatctttggtgagaaatgtgaaggaaacttcattcagccgact
ttcattacggattatccgatcgaaatgtctccactgacaaagaaacacagaagcaaagaa
ggtttaacagagcgttttgaattaatggtatgcggtaaagaaatcgctaacgcttattca
gagcttaatgatcctatcgatcagagagaacgttttgaagcacagatggcgttatctgaa
agaggagatgatgaagcaatgttcatcgatcaggacttcttaagagcgctggaatatggt
atgccgccaacttcaggattaggtatcggtatggacagattaattatgttcttaacgaat
aatgcctcaatccaggaagtattgttcttccctcagatgagacctgaaaaagcagttcca
cagattgaattaggtgaggatgagaaagtaatccttgaaatccttaactctcaggaagaa
gcaatgtctctagctgaagtaaaagaaagaagccagttatccggtaaaaaatgggataaa
gcttctaaaactttgacaaaaaataatattgtgaaagtagaaaagattgacgaaaatctt
ttgatgaaattggcttaa
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