KEGG   Chryseobacterium sp. KCF3-3: KCF3NO3_39360
Entry
KCF3NO3_39360     CDS       T11022                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
chrk  Chryseobacterium sp. KCF3-3
Brite
KEGG Orthology (KO) [BR:chrk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chrk03400]
    KCF3NO3_39360
Enzymes [BR:chrk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KCF3NO3_39360
    5.6.2.6  RNA 3'-5' helicase
     KCF3NO3_39360
DNA repair and recombination proteins [BR:chrk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KCF3NO3_39360
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: BFO67953
LinkDB
Position
complement(4562589..4565039)
AA seq 816 aa
MAAFEHTNGLKIIQQWMTDKGIAPFKFQLETWKKFGTGYSGMVVAPTGFGKTFSVFLALI
SDFLNHPEQYKKGLKMLWITPLRSLSKDIAKAMQEAIDEIGLDWVVGVRNGDTDPKVRQQ
QVKKMPEILVVTPESLHLLLAQKNNETFFKDMKCVAVDEWHELLGSKRGVMVELGISQLI
KYVPKIKIWGITATIGNLDEAMEVLIPYDIKKTKITAKEHKKIDILPVFPDEIEILPWAG
HLGNKLADKVVPIILESKSTIVFTNTRSQSEMWYQLLLDAYPDFAGQIAIHHSSIDAHLR
IWIEENLSSGKLKAVVSTSSLDLGIDFKPVDTVIQIGSAKGVARFLQRAGRSGHSPFETS
KIYCVPTHSLELIEVSALKEAVKQKVVEPREPQVLCFDVLVQFLMTLAVGDGFYPDELYQ
RIKKVYAFQEMLDEEWKSILEFLTIGGSVLKSYEEFHKIVIMEDGLYKVTSRKIAMLHRM
NMGVIVSDAMLKVKFISGGYIGMIEEYFISKLKKEEKFILAGRTLEVVIIKDMTVYVRAA
KGRALVPSYLGGRLPLSSNLGHFLREKLSHALNPKASEKELKFLHPLLINQEKNSHIPKE
DEFLVELIKNREGYHLFMYPFEGRLVHEVMAALIAYRISKLAPISFSMAMNDYGFELFSD
KEIPLNEDNLQQILSRENLMNDVITSINSAEMARRKFRDIAVISGMVIQNYAGQQRSNKS
LQSSAGLIFKVLEDHDPNHFLIKQAYTEVFNMQLQEQRLVEAFKRIEKSEIILKHSRSFT
PLSFPIKVDSLRQTLSSEGLDARIKRMLKLSDISDL
NT seq 2451 nt   +upstreamnt  +downstreamnt
ttggcagctttcgaacataccaacggattaaagatcattcagcaatggatgaccgataaa
ggtattgcccctttcaaatttcagctggaaacctggaagaaatttggaaccggatacagc
ggaatggtcgttgctcctacaggtttcggaaaaacattttctgtttttttagccttaatt
tcagatttcctgaatcatcccgaacaatataaaaaaggattaaaaatgctctggataacg
ccgcttcggtctctatccaaagatattgcaaaagcgatgcaggaggctattgatgaaatc
ggacttgattgggttgtgggcgtgagaaatggagatactgatccaaaagtaagacaacag
caagtcaagaaaatgcctgaaattcttgttgtaactcctgaaagccttcacctgcttctg
gcacagaaaaataatgaaacatttttcaaggatatgaaatgtgtagcagtggatgaatgg
catgaattactaggttcaaagcgcggagttatggtagaactcgggatttcacagcttata
aaatatgttccgaagatcaaaatctgggggatcacagctaccattggaaatctggatgaa
gccatggaagtgcttattccgtatgatattaaaaagacaaaaattacagctaaagagcac
aaaaagatagatattctccctgtttttccggatgaaattgagatattgccctgggcagga
catcttgggaacaaacttgcagataaagtggttcctattattctggaatcaaaatctacc
attgtatttacgaataccagaagtcagagcgaaatgtggtatcagcttttactcgatgct
tatcctgattttgcaggtcagattgccatccatcacagctctattgatgctcatttaaga
atctggattgaggaaaatttgagttccggaaaattaaaagctgtggtttctacatcatct
ctcgatcttggaattgattttaaacctgtagatactgtcattcaaattggttcagccaaa
ggagttgcccgttttcttcaaagagccggacgtagtggccactctccttttgaaacctcc
aaaatctattgtgttcccacccattctttggaactgattgaagtttcagctctaaaagaa
gccgtaaaacagaaagtcgttgaacccagagagccacaggttttatgtttcgatgtgctg
gttcagtttctgatgacactggcggttggagacggattttatcctgatgagctatatcag
agaattaaaaaagtatatgcctttcaggaaatgctggatgaagagtggaaaagtatcctc
gaattcctcaccattggcggcagtgtgttgaaaagctatgaagagtttcataaaatcgtc
atcatggaagatggtctttataaggtaacttcaagaaaaatagctatgctccaccgaatg
aatatgggcgtgattgtgagtgatgccatgctgaaggtaaaatttatttccggcggctat
atcggaatgattgaagaatattttatttcaaaattaaaaaaagaagaaaaatttattctg
gccgggcgtacactggaagttgtcatcattaaagatatgacggtatacgtgagggcagct
aaaggaagagccctggttccgagctatcttggcggaagacttcctttgagttccaatctg
gggcattttctgagagaaaaactttctcatgccttaaatcctaaagcttcggaaaaagag
cttaaatttttacacccgcttttaattaaccaggaaaaaaactcccatattcccaaagaa
gatgaatttttggtggaattgattaaaaaccgtgaaggatatcacttgtttatgtatcct
tttgaaggacgtctggttcatgaagtaatggctgctctgattgcctatcggatctcaaaa
cttgctccaatctccttttctatggcgatgaatgattatggatttgaactcttcagtgat
aaagaaattcctttaaatgaagacaatcttcaacagattttaagcagagagaatctgatg
aatgatgtgatcacaagtatcaattctgcggaaatggcaaggagaaaatttcgtgatatt
gcagtgatttctggaatggtaattcaaaattatgcagggcaacaacgttctaacaaatca
ttacaaagttctgccggattgatttttaaagtattggaagaccatgatcctaatcacttt
ttaataaaacaggcgtatacagaagtttttaatatgcagctccaggaacagcggcttgta
gaagcttttaaaagaattgaaaaatccgaaattattttaaaacattcccgatcatttact
ccgttgagttttccaattaaagtggacagtttacgacaaacgctttcaagtgaagggctg
gatgcgagaattaaaagaatgctgaaactgtctgatataagtgatctttga

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