Chryseobacterium sp. KCF3-3: KCF3NO3_41560
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Entry
KCF3NO3_41560 CDS
T11022
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
chrk Chryseobacterium sp. KCF3-3
Brite
KEGG Orthology (KO) [BR:
chrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrk03032
]
KCF3NO3_41560 (gyrA)
03400 DNA repair and recombination proteins [BR:
chrk03400
]
KCF3NO3_41560 (gyrA)
Enzymes [BR:
chrk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KCF3NO3_41560 (gyrA)
DNA replication proteins [BR:
chrk03032
]
Prokaryotic type
DNA Topoisomerases
KCF3NO3_41560 (gyrA)
DNA repair and recombination proteins [BR:
chrk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KCF3NO3_41560 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BFO68173
LinkDB
All DBs
Position
complement(4815112..4817712)
Genome browser
AA seq
866 aa
AA seq
DB search
MQKEGERLIPINIVDEMKSSYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMYGLGVFSN
RKYLKSARIVGDVLGKYHPHGDSSVYDAMVRMAQDWSLRYPQVDGQGNFGSMDGDPPAAM
RYTEARLKKISDEVLSDLDKETVDFQNNFDDSLQEPTVMPTKVPNLLVNGTSGIAVGMAT
NMAPHNLSESVDAICAYIDNKEITIDELMQHIIAPDFPTGGIIYGYDGVRDAFHTGRGRV
VLRAKVNFDEIGNRNAIIVTEIPYQVNKAEMIARTAELVKDEKIPGIHEIRDESDRKGLR
VVYELKNDAIPNVVLNLLYKYTALQTSFSVNNIALVHGRPEQLNLKDIIHHFVEHRHEVI
VRRTQYELKKAKERAHILEGFMKVIGTQDSLDRAISIIRHSANPQAAKEGLIEAFELSDI
QAQAILDLRLARLTGMELDKIRDEYDAIMKEIANLEDILANEPRRFQIIKEELIEIKEKY
GDERRTEIDYSGGEMSIEDIIPNESVVLTISHAGYIKRTSLSEYKIQSRGGVGNKAATTR
DSDFLEYIVSATNHQYMLFFTEKGRCYWLRVFEIPEGSKTAKGRAVQNLINIEPDDKIKA
YIRTNNLKDSEYVNQMSVVMVTKNGTIKKTSLEAYSRPRVNGVNAIEIRDNDQLLGAYLT
NGESQIMIATKNGKCIRFPEEKVREVGRGSIGVRGILLEEGDEAIGMIVVSDVENETVLV
VSEKGYGKRTAVEDYRITNRGGKGVITLNITEKTGNLIAIQNVTDEDGLMIINKSGVAIR
MGMDEMRVMGRNTQGVKLINLKKNDEIAAIAKVEMDKDVEEDSEELEETEEGVVGSLFDN
QENDNVTPQAENENSAEENENSDSEE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagaaggagaaagactgattcctatcaacattgttgatgaaatgaagtcgtct
tatatcgattattcgatgtcggttatcgtttcaagagcgttaccggatgtaagagacggc
ttgaaacccgttcatagaagagtactttatggtatgtatggattaggggtattttctaac
agaaaatatttaaaatctgcgagaattgttggggatgtattaggtaaataccacccacac
ggagattcctctgtatatgatgctatggtaagaatggcacaggattggagcttacgttat
cctcaggtagacggacagggtaacttcggttctatggatggtgacccgcctgcagcaatg
cgttataccgaggcaagattgaaaaaaatctctgatgaggttctttcagacctagacaaa
gaaacagttgattttcagaataacttcgacgacagtttacaggagccgacagtaatgcct
actaaagttcccaatcttttggtaaacggtacttcaggtattgccgtaggtatggcaacc
aatatggcacctcataacctgtcagaatccgtagatgcaatctgtgcttatatcgataat
aaagaaattacgattgatgagctgatgcagcacattattgcgccggatttccctacaggt
ggtatcatctatggatatgacggagtaagagatgctttccatacaggaagaggtagagta
gttttaagagctaaagtgaactttgatgaaatcggaaacagaaacgcgattatcgttact
gaaatcccttatcaggtgaacaaagctgaaatgatcgccagaacagcagagcttgttaaa
gacgaaaaaatccctggtatccacgagatcagagacgaatcggatagaaaaggacttcgt
gtggtttacgaattgaaaaatgacgcaatcccgaatgtagttcttaacttattatataaa
tatacggcacttcagacttctttcagtgtaaacaatattgcattggtacacggaagaccg
gagcagctgaaccttaaagatatcattcatcactttgtagagcacagacatgaggtaatc
gtaagaagaactcagtatgagcttaaaaaagcaaaagaaagagcacacattcttgaagga
ttcatgaaagtgatcggaactcaggattctctggacagagcaatttctattatccgtcac
agtgcaaaccctcaggctgcaaaagaaggcttgatcgaagcatttgaactttcagacatt
caggctcaggctattctagatcttagattagctcgtttaacaggaatggagcttgataag
atccgtgatgaatacgatgcgatcatgaaagaaattgcaaatttggaagatatcttagcc
aacgagccgagaagattccagatcatcaaagaagaattgatcgaaatcaaagaaaaatac
ggagacgaaagaagaactgaaattgattattcaggaggagaaatgtctattgaagatatc
atccctaacgaatctgtagttcttacgatctctcatgcaggatacatcaagagaacttca
ctttcagaatataaaattcaaagtagaggtggtgtaggaaacaaagcagcaacaacaagg
gattccgacttccttgagtatattgtttctgcaaccaaccaccagtatatgttattcttt
acagaaaaaggaagatgttactggttaagagtatttgaaattcctgaaggctctaaaaca
gcaaaaggaagagcggtacaaaaccttatcaacattgaaccggatgataagattaaagct
tatatcagaacgaacaatcttaaggattctgaatatgtaaatcaaatgagcgttgtgatg
gtaaccaaaaacggtacaatcaagaaaacatcattggaagcgtattcaagaccaagagta
aacggggtaaatgctatcgaaattagagataatgaccagttattaggtgcttaccttacc
aacggagaatctcagattatgattgctactaaaaatggtaaatgtatccgtttccctgaa
gagaaagtaagagaagtaggaagaggatctatcggggtaagagggatcttgcttgaagaa
ggtgacgaagctattggtatgattgttgtgagcgatgtagagaacgaaacagtacttgta
gtatctgaaaaaggatacggaaagagaactgcagtagaagactacagaattaccaacaga
ggaggaaaaggagttattacccttaacattactgaaaaaacaggaaatcttatcgctatt
caaaatgtaacagacgaagacggattgatgattatcaacaaatccggtgttgcgatcaga
atgggaatggatgaaatgagagtgatgggtagaaatactcagggagtgaaactgatcaac
cttaagaaaaatgacgaaattgcagccattgcaaaagtagaaatggataaagatgtagaa
gaagattctgaagaacttgaagaaacagaagaaggagttgtaggatcgctatttgataac
caggaaaatgacaatgtaacacctcaggctgaaaatgaaaactcagcagaggaaaatgag
aattctgattctgaagaataa
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