Chryseobacterium sp. KCF3-3: KCF3NO3_41630
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Entry
KCF3NO3_41630 CDS
T11022
Symbol
uvrA_2
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
chrk Chryseobacterium sp. KCF3-3
Pathway
chrk03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
chrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KCF3NO3_41630 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KCF3NO3_41630 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
UvrA_DNA-bind
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_21
AAA_25
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
BFO68180
LinkDB
All DBs
Position
complement(4821569..4824400)
Genome browser
AA seq
943 aa
AA seq
DB search
MSKSTEYIEVYGAREHNLKNINVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIET
FSAYARQFLGGLERPDVDKIEGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLYARVS
DAYSLSTGQKLVSYTEDQILETIKENYKKEKIMLLAPVVRSRKGHYHELFVQMAKKGYGQ
ARIDGELQDIEYDLKLDRYKTHDIDIVIDRWIIGENASEGRMEKSLRTAMEMGEGIIGIQ
KLGSTDIEYFSKNLMDAETGHSLALPEPNTFSFNSPKGSCPNCKGLGTIKKINTDYFIDN
PKLSINQGGLLPLEDIKSNKWILSQIKNILEIFGLGLTTPLQDIPEEALDYIYNGCHKEF
NKDLKYAGITKKIKIGFDGLIAFMEEIIDERESYEAILLERHFTTEETCPECHGARLQPS
SLSFKIDGKNIAEVNGLSLADLKDWLADVKDKFSEKNKIIAHEILKEIETRLQFLLDVGL
DYLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLIHSLKNLR
DIGNSVLVVEHDKDMILEADEVLDIGPRAGKFGGEILWQGKPKDLLKADTITAQYINGKR
KIAIPEERRAGSGKNIVLKGATGNNLKNVTLDIPLGKLVVVTGISGSGKSSLINGTLYPI
LNKHFYRAVQEPLPYKKIEGLDNIDKIVDVDQTPIGRTPRSNPATYTGMFTDIRNLFAEL
PESKIRGYKPGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEV
RYKGKSISDVLDMTIDEAVDFFQPIPKIFAKVKTLQDVGLGYITLGQQSTTLSGGEAQRI
KLATELAKRQTGNTLYILDEPTTGLHFEDVKILMDAINQLVELGNSFIIIEHNMDVIKLA
DHIIDVGPEGGKYGGQIVAQGTPEEIVKSKKSLTGKFLKRELE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcaacagaatatatagaagtttacggagcacgtgaacacaatcttaaaaat
attaatgtaaaaattccacgtaatgaattggtcgtgattaccggcctttccggaagtgga
aaatcgtcattggctttcgatactatttttgcggaaggccagcgtcgttatatcgaaaca
ttctctgcctatgcacgtcagtttctaggtgggttggagcgtcctgatgtagataaaatt
gaaggactttctccggttattgctatcgagcagaaaacaaccaataaaaatccgcgttct
accgtaggaacggttactgagctgtacgactttctgcgtcttttgtatgcaagagtttcg
gatgcttactctttatctacaggacagaagttggtaagctataccgaagatcagatcctt
gaaaccatcaaagaaaactataaaaaagagaaaatcatgcttttggcaccagtggtgcgt
tccagaaaaggacattatcatgagctctttgttcagatggctaaaaaaggctacggacag
gcaagaattgatggcgagctgcaggatattgaatatgatttaaaacttgaccgttataaa
acccacgacatcgatatcgttatcgatcgttggattatcggtgagaatgcttcggaaggc
agaatggaaaaatcattgcgtactgcaatggaaatgggagaaggcattatcggaattcag
aaactgggaagtacagatatcgaatacttttccaagaacctgatggatgctgaaaccgga
cattctttggcgctacctgaacccaatacattctcattcaactctccaaaaggaagctgt
ccgaattgtaaaggtcttggaaccattaaaaagatcaataccgattatttcatcgataat
cctaaactgtcaatcaatcagggaggattattgccattggaagatatcaagtctaacaaa
tggattctgtcacaaattaaaaatatcctagagatcttcggattgggattaacaacacct
ttgcaggatattccggaagaagcactggattatatctacaacggatgtcataaagaattc
aataaagacctgaaatacgcaggaattaccaagaaaataaaaattggttttgatggtttg
attgctttcatggaagaaattattgatgaaagagaatcttatgaagccattttactggaa
agacatttcaccacagaagaaacctgcccggaatgtcatggagcccgtcttcagccttca
agtttaagttttaaaattgatggaaaaaatattgcggaagttaatggattaagcttagca
gatttaaaagactggttagctgatgttaaagataaattttcagaaaaaaataaaatcatt
gctcacgagatcttaaaagaaattgaaaccagacttcagtttttactggatgtagggttg
gattatttaagtctgagcagaagttcaaaaaccctttctggaggagaatcacagagaatt
cgtcttgcaacgcagatcggttctcaactggtcaatgtattgtatattctcgatgagcca
agtatcgggcttcaccagagagataatgaaagactgatccattctctgaaaaacctgaga
gatattggaaactctgtattggtggtagaacatgataaagatatgattcttgaagccgat
gaggtgctggatattggtccgagagcagggaaattcggtggagaaatcctttggcaggga
aaaccaaaagacctgttgaaagcagataccatcactgctcaatatattaacggaaaaaga
aaaattgcaattcctgaagaaagaagagcaggaagcggtaaaaatattgttttaaaagga
gctacagggaacaaccttaaaaatgtaactctggatattcctcttggaaaactcgttgta
gtaaccggaatttcaggaagcggaaaatcctcattgataaacggaacattatatccgatc
cttaacaaacatttctacagagcggttcaggaaccgttaccatacaaaaagattgaaggg
ttagataatattgataaaattgtagatgtagatcagactccaatcggaagaacgccacgt
tcgaatcctgcgacctataccggaatgtttaccgatatcagaaacctttttgcagaactg
ccggaaagtaaaatccgtgggtataagccaggaagattctctttcaacgtaaaaggcgga
agatgcgaaacctgtcagggtggaggattaaaagtgatcgaaatgaatttccttccggat
gtatacgtacactgtgaaacctgtaacgggaaacgtttcaacagagaaaccctggaagtt
cgttacaaaggaaaatcaatttctgacgtattggacatgacgatcgatgaagcggtagat
ttcttccagccgattcctaagatttttgcaaaagtgaaaacattacaggatgtaggtttg
ggatacattacgcttggacagcaatcgaccaccctttctggaggtgaagcgcaacgtatc
aagttagcaaccgaactggcgaaaagacaaaccggaaataccctttatatccttgatgaa
cccactacaggacttcattttgaagacgtgaaaatcctgatggatgctatcaatcaattg
gtagaactaggaaactcattcatcatcatcgaacataatatggatgtcatcaaattagca
gatcatatcatcgacgtaggaccggaaggaggaaaatatggcggacagatcgttgcacag
ggaactcctgaggaaattgtgaagtctaagaaaagcttgacagggaagtttttgaagagg
gaactggagtag
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