Chryseobacterium sp. KCF3-3: KCF3NO3_42040
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Entry
KCF3NO3_42040 CDS
T11022
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
chrk Chryseobacterium sp. KCF3-3
Pathway
chrk02024
Quorum sensing
chrk03060
Protein export
chrk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chrk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KCF3NO3_42040 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KCF3NO3_42040 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KCF3NO3_42040 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chrk02044
]
KCF3NO3_42040 (ffh)
Enzymes [BR:
chrk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KCF3NO3_42040 (ffh)
Secretion system [BR:
chrk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KCF3NO3_42040 (ffh)
Eukaryotic Sec-SRP protein
KCF3NO3_42040 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
cobW
SRPRB
nSTAND3
CLP1_P
APS_kinase
ATP_bind_1
ATPase
ResIII
AAA_18
ArsA_ATPase
MMR_HSR1
AAA_24
AAA_31
AAA_16
DO-GTPase1
NPHP3_N
KAP_NTPase
6PF2K
AAA_14
RRM_Nup35
AAA_33
KTI12
SLFN-g3_helicase
DUF2780
ATPase_2
AAA_19
NACHT
TsaE
Motif
Other DBs
NCBI-ProteinID:
BFO68221
LinkDB
All DBs
Position
4863914..4865275
Genome browser
AA seq
453 aa
AA seq
DB search
MFNSLQDKLDKALHNISGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAL
GENVLTSLTPGQLMTKIVHDELVDLMGGSQEGINLSGKPTIILIAGLQGSGKTTFSGKLA
NYLQTKRNKKPLLVACDVYRPAAIDQLKVLGGQINVPVFTEEGSTNPSTIAENAINFAKS
NGHDVVIVDTAGRLAIDEQMMNEIKSVHYFIKPNETLFVVDSMTGQDAVNTAKAFNDALN
FDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAIK
DVEISDDAFKHIEAIIYSMTPEERRRPSIINTQRKGRIAKGAGRKIEDVNQLMKQFDQMG
KMMKMMQGPQGKQMMQMMSKMPNMPGMGGMFGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatagtttacaggataaattagacaaggcattacacaatatttccggtagagga
aaaattaccgaaatcaatgttgcggaaaccgtaaaggagatccgtagagcattggtggat
gccgacgttaactataaagttgccaaagatcttacaaaaagagttcaggataaagcatta
ggagaaaacgttcttacttcccttacgccgggacagttgatgacgaaaattgttcatgat
gaattggtagacctgatgggaggttctcaggaaggaattaatctttcgggaaaaccaact
ataatccttattgcaggtcttcagggatctggtaagacgactttctcaggaaagcttgct
aattatttacagacaaaaagaaataaaaaacctttattggtagcatgtgacgtttaccgt
cctgcagcaattgaccagttgaaggtattaggaggacagattaatgttcctgttttcaca
gaagaaggttctacaaatccttctaccattgctgaaaacgcaatcaactttgcaaaatca
aacggtcatgatgtggtgattgtggatacggcaggtcgtttggctattgatgagcagatg
atgaacgagattaaatctgttcattacttcattaaacctaatgaaacgctattcgtagta
gactctatgacgggtcaggatgctgtgaatacagcaaaagcattcaacgatgctttgaac
tttgacggagttgttttaacgaaattagatggtgatacaagaggtggtgctgcactgaca
atccgttctgttgttgaaaagccaatcaaatttatctctacaggagaaaaaatggaagct
ttagatcttttctacccggaaaggatggcagacagaatcctgggaatgggagacgttgtt
tccttagtagaaagagctcaggagcagtttgacgaagaagaagctaaaaaacttcacaaa
aaaattgctaaaaacgaattcggttttgacgatttccttaagcagatcaatcaaatcaag
aagatgggtaacatgaaggatttgatgggaatgattcctggagttggaaaagcgattaaa
gacgtagaaatcagtgatgatgcgtttaagcatattgaagctattatttactctatgact
cctgaagaaagaagaagaccttctatcatcaatacacagagaaaaggtagaattgctaaa
ggtgcaggaagaaaaatcgaagacgtgaatcaattgatgaaacagttcgatcaaatgggt
aaaatgatgaagatgatgcaaggacctcaaggaaagcaaatgatgcagatgatgagcaaa
atgccaaatatgcctggaatgggtggaatgttcggaaaataa
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