Chromobacterium paludis: FYK34_00045
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Entry
FYK34_00045 CDS
T06224
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm00521
Streptomycin biosynthesis
chrm00523
Polyketide sugar unit biosynthesis
chrm00525
Acarbose and validamycin biosynthesis
chrm00541
Biosynthesis of various nucleotide sugars
chrm01100
Metabolic pathways
chrm01110
Biosynthesis of secondary metabolites
chrm01250
Biosynthesis of nucleotide sugars
Module
chrm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FYK34_00045 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FYK34_00045 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FYK34_00045 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FYK34_00045 (rfbB)
00525 Acarbose and validamycin biosynthesis
FYK34_00045 (rfbB)
Enzymes [BR:
chrm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FYK34_00045 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
QEL54088
UniProt:
A0A5C1DM06
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Position
complement(5011..6078)
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AA seq
355 aa
AA seq
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MTILVTGGAGFIGGNFVLDWLANHDETVVNLDALTYAGNLDTLQSLQQDARHVFVHGSIG
DRNLVDALLTKHQPRAVINFAAESHVDRSIHGPGDFIQTNIVGTFNLLESVRGYWDGLNS
EQQATFRFLHVSTDEVYGTLSPEDAPFAETHRYEPNSPYSASKAASDHLVRAWHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGDGQQVRDWLYVKDHCSAIRRVLE
AGTLGETYNVGGWNEKANLDVVHTICAILDELKPRADGDSYASQITFVQDRPGHDRRYAI
DARKLEKELGWKPAETFETGIRKTVQWYLDNPQWVDNVTSGHYRDWINQHYGQPA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgactattctcgtgaccggcggcgccggattcataggcggcaatttcgttctcgactgg
ctggccaaccacgatgaaaccgtcgtcaacctagatgccttgacctatgccggcaacctg
gacaccctgcaatccttgcagcaagacgctcgccatgtctttgtccatggcagcattggc
gaccgcaatctagtcgatgccctgctgaccaaacaccaaccacgcgcggtcatcaacttt
gcggcagaaagccatgtcgaccgctccatccatggtcccggtgattttatccaaaccaat
atcgtcggcaccttcaacttgctggaaagcgtccgcggttactgggatggcctgaactcc
gaacagcaagccaccttccgcttcctgcacgtgtccaccgacgaagtctacggcacgctg
tcgccggaagacgcgcccttcgccgaaacgcatcgttacgagcccaacagcccgtactcg
gcatcgaaagccgcctcggaccacctggtgcgcgcctggcaccatacttatggcctgccc
gtactgaccacaaactgcagcaacaattacggcccctaccacttcccggaaaagctaatt
ccgctggtcatcctcaacgcgctggccggcaagccattgcccatttatggtgatggccag
caagtacgcgactggctgtatgtgaaagaccactgcagcgccattcgccgcgtactggaa
gccggcacgctgggcgaaacctataatgtcggcggctggaatgaaaaagccaatctggac
gtggttcataccatctgcgcgattctggacgagctcaagccacgcgccgatggcgatagc
tatgcgtcgcagatcaccttcgtgcaggaccgccccggccatgaccggcgttatgcgata
gacgcgcgcaagctggaaaaggaattgggctggaaacccgcggagacttttgaaaccggc
attcgcaagaccgtgcagtggtatctggacaatccgcaatgggtcgacaacgtcaccagt
ggccattaccgcgactggatcaaccaacactacggccaacccgcatga
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