Chromobacterium paludis: FYK34_00230
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Entry
FYK34_00230 CDS
T06224
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
chrm
Chromobacterium paludis
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_00230
Enzymes [BR:
chrm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
FYK34_00230
DNA repair and recombination proteins [BR:
chrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
FYK34_00230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QEL54119
UniProt:
A0A5C1DDV2
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All DBs
Position
complement(40816..42345)
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AA seq
509 aa
AA seq
DB search
MTTLRLILGDQLNPCHSWFAAPNPDVVHVMMEIRQETDYVRHHAQKILAVFAAMRDFAAQ
LKARGHRVRYVAIDDASNRQSLIGNLDVLIEHYQASAVAYQAPDEWRLDRQLAEWAKNLS
IPCLMADSEHFYTARGEAAALFGARRQWRQETLYRHLRRQHGILMDENGEPACGRWNFDA
DNRQRWPGDPPEPQDPRPAHDHSKLWQTIVDAGVDSFGQPQAGALRWPLNRAEALAQLRA
FIEHALPHFGAYQDAMSPRARRLFHSLLSFALNVKMLNPREVVDAAVAAWRQGRAPLAAV
EGFTRQILGWREYVRGVYWAKMPGYRDSNALAHHLPLPRWFWDGDTGLRCLAHAIGQSLD
DAYAHHIQRLMVIGNFGLIAGLSPQALHQWYLGVYIDAFEWVELPNTLGMSQFADGGLLG
SKPYAGSAAYIGRMGDYCAGCRYRPKQRVGADACPFNALYWDFFQRHRARLAANPRLALV
YRQQDKLPEAERAAIAARAGWLQTNLDAL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccttgcggctgatcctgggcgaccagctcaatccctgccacagctggttcgcc
gcgcccaatccagacgtggtgcatgtgatgatggaaatccgccaggaaaccgattacgtg
cgccaccacgcgcagaaaatcctggccgtcttcgccgcgatgcgcgacttcgccgcccaa
ttgaaagcgcgaggccaccgcgtgcgctacgtggcgatagacgatgccagcaaccgccag
tctctgatcggcaatctggacgtgctgatcgagcattaccaagcgtcggcggtggcatac
caggcgccggacgagtggcggctggaccgccaactggcggagtgggccaagaatctgtcc
atcccctgcctcatggcggacagcgagcatttctacaccgcgcgcggcgaggcggccgcc
ttgttcggcgcgcgccggcaatggcggcaggagaccctgtatcgccacctgcggcgccag
cacggcatcttgatggatgaaaacggcgagcctgcctgcggacgctggaatttcgacgcc
gacaaccgccaacgctggcccggcgatccgcccgaaccgcaggacccgcgtccggcgcac
gaccacagcaagctgtggcaaaccattgtcgacgccggcgtggacagcttcggccagccg
caggcgggcgcgctgcgctggccgctcaaccgcgccgaggccctcgcgcagctgcgcgcc
ttcatcgaacatgcgctgccgcatttcggcgcctatcaggacgcgatgagtccgcgcgcg
cggcggctgttccattcgctgctgtcttttgcccttaacgtcaaaatgctgaacccgcgc
gaggtagtggacgccgccgtcgccgcctggcggcagggccgcgcgccgctggccgcggtg
gaaggcttcacgcggcagatactgggctggcgcgaatacgtgcgcggcgtgtattgggcc
aaaatgcccggctaccgcgacagcaacgcgctggctcaccatctgccgctgccgcgctgg
ttctgggacggcgacaccggcctgcgctgcctcgcccacgccatcggccaatcgctggac
gacgcctacgcccaccacatccagcggctgatggtgataggcaatttcggcctgatcgcc
ggcctgtcgccgcaggcgctgcaccaatggtatctgggcgtctacatcgacgccttcgaa
tgggtggagctgcccaacacgctgggcatgagccagttcgccgacggcgggctgctgggc
agcaagccctacgccggcagcgccgcctatatcggccgcatgggcgattactgcgccggc
tgccgctaccgtcccaagcagcgcgtcggcgcagacgcctgcccgttcaatgccttgtac
tgggattttttccaacgccatcgcgcgcggctggccgccaatccgcggctggccctggtc
taccgccagcaggataagctgcctgaggccgaacgcgccgccatcgccgcgcgcgccggc
tggctgcaaaccaacctcgacgcactgtga
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