KEGG   Chromobacterium paludis: FYK34_01000
Entry
FYK34_01000       CDS       T06224                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
chrm  Chromobacterium paludis
Pathway
chrm00010  Glycolysis / Gluconeogenesis
chrm00020  Citrate cycle (TCA cycle)
chrm00260  Glycine, serine and threonine metabolism
chrm00280  Valine, leucine and isoleucine degradation
chrm00310  Lysine degradation
chrm00380  Tryptophan metabolism
chrm00620  Pyruvate metabolism
chrm00630  Glyoxylate and dicarboxylate metabolism
chrm00640  Propanoate metabolism
chrm00670  One carbon pool by folate
chrm00785  Lipoic acid metabolism
chrm01100  Metabolic pathways
chrm01110  Biosynthesis of secondary metabolites
chrm01120  Microbial metabolism in diverse environments
chrm01200  Carbon metabolism
chrm01210  2-Oxocarboxylic acid metabolism
chrm01240  Biosynthesis of cofactors
Module
chrm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
chrm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chrm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
chrm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:chrm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FYK34_01000 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FYK34_01000 (lpdA)
   00620 Pyruvate metabolism
    FYK34_01000 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FYK34_01000 (lpdA)
   00640 Propanoate metabolism
    FYK34_01000 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FYK34_01000 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FYK34_01000 (lpdA)
   00310 Lysine degradation
    FYK34_01000 (lpdA)
   00380 Tryptophan metabolism
    FYK34_01000 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FYK34_01000 (lpdA)
   00670 One carbon pool by folate
    FYK34_01000 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chrm04147]
    FYK34_01000 (lpdA)
Enzymes [BR:chrm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FYK34_01000 (lpdA)
Exosome [BR:chrm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FYK34_01000 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C FAD_binding_2 HI0933_like Pyr_redox_3 NAD_binding_8 FAD_oxidored GIDA FAD_binding_3 3HCDH_N 2-Hacid_dh_C DAO XdhC_C
Other DBs
NCBI-ProteinID: QEL54255
UniProt: A0A5C1DC74
LinkDB
Position
199523..200956
AA seq 477 aa
MSQQFDVVVIGGGPGGYVAAIRAAQLGFSAACVDAFKNPEGKPSLGGTCLNVGCIPSKAL
LQSSENFHAVQHDYAKHGITVSGAKMDVGQMLARKTDIINKNAAGIGFLFKKNKVANIHG
LAAFKGRQGDKWVIEVTDNGAVVDTLEAGHVIVATGSSPRALPGLATDNQLVLDNEGALA
LTAVPKRLGVIGAGVIGLEMGSVWKRLGAEVTILEAAPTFLAAADQQIAKEAFKTLTKDT
GLDIKLGVKIGEVKAGKKSVAVNYELNGEAVKAEFDKLIVSIGRVPNTQGLGADVVGLAL
DERGFVAVDDHCRTNLPNVWAIGDVVRGPMLAHKASEEGVAVAERIAGQKPHVDFGVIPW
VIYTSPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALGLGQAQGMVKILADAKTDRIL
GLHMIGPMVSELVSEGVVSMEFKAASEDLARIIHAHPSLSEVIHEAALAADKRALHG
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagccaacagtttgatgtggtagtgataggcggcggccccggcggctacgtcgcagcc
atccgcgcggcccagctgggcttcagcgcggcttgcgtggacgcgttcaaaaacccggaa
ggcaagccttccctgggcggcacctgcctgaacgtgggctgcattccgtccaaggccctg
ctgcagtcgtcggaaaacttccacgccgttcagcatgactacgccaagcacggcatcacc
gtttcgggcgccaagatggacgtgggccagatgctggcccgcaagaccgacatcatcaac
aagaacgccgccggcatcggcttcctgttcaagaagaacaaggtcgccaacatccacggc
ctggccgccttcaagggccgccagggcgacaagtgggtgatcgaagtcaccgacaacggc
gcggtggtggacaccctggaagccggccacgtgatcgtggccaccggctccagcccgcgc
gcgctgccgggcctggctaccgacaaccaactggtgctggacaacgaaggcgcgctggcg
ctgaccgccgtgcctaagcgcctgggcgtgatcggcgccggcgtgatcggcctggaaatg
ggttcggtgtggaagcgcctgggcgcggaagtgaccatcctggaagccgcgccgaccttc
ctggccgccgccgaccagcagatcgccaaggaagcgttcaagacgctgaccaaggacacc
ggcctggacatcaagctgggcgtgaagatcggcgaagtgaaggccggcaagaagagcgtc
gccgtcaactacgaattgaacggcgaagcggtgaaggccgagttcgacaagctgatcgtc
tccatcggccgcgtgccgaatacccagggcctgggcgccgatgtggtgggcctggccctg
gacgagcgcggctttgtcgccgtggacgaccactgccgcaccaatctgcccaatgtgtgg
gcgatcggcgacgtggtgcgcggcccgatgctggcgcacaaggcgtcggaagaaggcgtg
gccgtggccgaacgcatcgccggccagaagccgcacgtggatttcggcgtgattccgtgg
gtgatctacacctcgccggaaatcgcctgggtcggcaagaccgaagagcagctgaaggcc
gaaggcgtcgagtacaagaagggcacgtcgggcttcggcgccaacggccgcgcgctgggc
ctgggccaggcgcagggcatggtcaagatcctggcggacgccaagaccgaccgcatcctg
ggcctgcacatgatcggcccgatggtgtccgagctggtcagcgaaggcgtggtaagcatg
gagttcaaggccgccagcgaagacctggcgcgcatcatccacgcccacccgtcgctgtcg
gaagtgatccacgaagccgccctcgccgccgacaagcgcgcgttgcacggttga

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